ADAM33 Gene
protein-coding GIFtS : 60
GC20M003596
ADAM metallopeptidase domain 33 (Previous names: a disintegrin and metalloproteinase domain 33, chromosome 20 open reading frame 153 )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbol: C20orf153 )
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Aliases & Descriptionsfor ADAM33 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions ADAM metallopeptidase domain 331 2 FLJ367512 DKFZp434K05211 2 disintegrin and reprolysin metalloproteinase family protein2 a disintegrin and metalloproteinase domain 331 2 MGC1498232 ADAM 332 3 DJ964F7.12 C20orf1532 3 a disintegrin and metalloprotease 332 dJ964F7.11 MGC718892 chromosome 20 open reading frame 1531 FLJ353082 disintegrin and metalloproteinase domain-containing protein 332 EC 3.4.24.-3
Export aliases for ADAM33 gene to outside databases Previous GC identifers: GC20M003637 GC20M003643
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Summariesfor ADAM33 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for ADAM33 : This gene encodes a member of the ADAM (a disintegrin and metalloprotease domain) family. Members of this family are membrane-anchored proteins structurally related to snake venom disintegrins, and have been implicated in a variety of biological processes involving cell-cell and cell-matrix interactions, including fertilization, muscle development, and neurogenesis. This protein is a type I transmembrane protein implicated in asthma and bronchial hyperresponsiveness. Alternative splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq) Gene Wiki entry for ADAM33
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Genomic Viewsfor ADAM33 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the ADAM33 gene promoter: NF-kappaB1 TBP p300 AhR NF-kappaB STAT1 STAT1beta STAT1alpha YY1 PPAR-gamma2 Other transcription factors Search SABiosciences Chromatin IP Primers for ADAM33 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for ADAM33
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 20p13 Ensembl cytogenetic band: 20p13 HGNC cytogenetic band: 20p13 ADAM33 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure
GeneLoc location for GC20M003596: view genomic region
(about GC identifiers )
Start:
3,596,952 bp from pter
End:
3,611,071 bp from pter
Size:
14,120 bases
Orientation:
minus strand
1 alternative location : Chr 20- 3,648,612-3,662,893
RefSeq DNA sequence: NC_000020.10 NT_011387.8
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Proteinsfor ADAM33 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11 (See
protein sequence )Recommended Name: Disintegrin and metalloproteinase domain-containing protein 33 precursor Size : 813 amino acids; 87739 Da
Cofactor : Binds 1 zinc ion per subunit (By similarity)
Subcellular location : Membrane; Single-pass type I membrane protein
PDB structure from and Proteopedia : 1R54 (3D)
 1R55 (3D)
 
Secondary accessions : A0A1K6 Q5JT75 Q5JT76 Q8N0W6Alternative splicing : 3 isoforms : Q9BZ11-1 Q9BZ11-2 Q9BZ11-3 Explore the universe of human proteins at neXtProt for ADAM33: NX_Q9BZ11 Post-translational modifications:
The precursor is cleaved by a furin endopeptidase (By similarity)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_079496.1 NP_694882.1 ENSEMBL proteins: ENSP00000404681 ENSP00000350730 ENSP00000353845 ENSP00000405339 ENSP00000369190 ENSP00000340571 ENSP00000400474 ENSP00000322550 ENSP00000318839 ENSP00000348912 Human Recombinant Proteins 2 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
About this table
ADAM33 for ontologies About GeneDecksing Antibodies for ADAM33: Assays for ADAM33:
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Protein
Domains/ Familiesfor ADAM33 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
ADAM33 for domains About GeneDecksing 5/8 InterPro domains/families (see all 8 ):
Graphical View of Domain Structure for InterPro Entry Q9BZ11 ProtoNet protein and cluster: Q9BZ11
3 Blocks protein families : IPB001762 Disintegrin IPB002870 Metalloendopeptidase M12B IPB006586 ADAM UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11 Domain : The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting theenzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme Similarity : Contains 1 disintegrin domainSimilarity : Contains 1 EGF-like domainSimilarity : Contains 1 peptidase M12B domain
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Gene Functionfor ADAM33 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section 4 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
ADAM33 for ontologies About GeneDecksing Animal Models: 2 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Adam33) :
ADAM33 for phenotypes About GeneDecksing
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Pathways & Interactionsfor ADAM33 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section SABiosciences Custom Pathway-Focused PCR Arrays for ADAM33 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for ADAM33 1 Interacting protein for ADAM33 (Q9BZ11 2 ) via UniProtKB, MINT, and/or STRING About this table 1 Gene Ontology (GO) biological process term (GO ID links to tree view) :
About this table
ADAM33 for ontologies About GeneDecksing
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Drugs & Compoundsfor ADAM33 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for ADAM33
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Transcriptsfor ADAM33 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for ADAM33 gene (2 alternative transcripts): NM_025220.2 NM_153202.1
Additional cDNA sequence: AB055891.1 AF466287.1 AF466289.1 AK092627.1 AK095953.1 AK123015.1 AK126487.1 AK126498.1 AK226148.1 AK300429.1 AK304037.1 AY223850.1 AY223851.1 AY223852.1 AY223853.1 AY223854.1 AY223855.1 AY358314.1 BC062663.1 BC125112.1 BC125113.1
17 DOTS entries : DT.101984427 DT.97794136 DT.100665070 DT.100777324 DT.434730 DT.95227190 DT.120839396 DT.100022366
DT.120839384 DT.120839395 DT.100022367 DT.120839388 DT.120839376 DT.434823 DT.120839391 DT.120839397 DT.120839401 24/74 AceView cDNA sequences (see all 74 ):
AY223852 NM_025220 CD632564 NM_153202 CD632594 AW594247 AY223853 CD632575 BU150601 AF466287 AI370810 AY223851 BM510563 AF466289 AI537771 AB055891 AY223854 AW131070 BU783941 BV196131 AY358314 CD172502 F19469 BM511392
highest scoring ESTs for ADAM33 :AB055891 AF466287 AF466289 AK095953 AK123015 AK126487 AK126498 AY358314 CD632573 AA197050 Unigene Cluster for ADAM33:
ADAM metallopeptidase domain 33 Hs.173716 [show with all ESTs ] Unigene Representative Sequence: AK226148 GeneLoc Exon Structure 5/19 Alternative Splicing Database (ASD) splice patterns (SP) for ADAM33 (see all 19 ) ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c · 5d ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · SP1 :             -       -       -   -                         -   SP2 :             -       -       -   -                         -   SP3 :                                                     SP4 :             -       -                                   SP5 :             -       -         -       -   -   -       -   -   -   -   -  
ExUns: 14b ^ 15 ^ 16a · 16b ^ 17 ^ 18a · 18b · 18c ^ 19 ^ 20 ^ 21a · 21b ^ 22a · 22b · 22c ^ 23 ^ 24a · 24b · 24c · 24d SP1 :     -                   -   -   -               SP2 :     -                   -   -   -               SP3 :     -                   -   -   -               SP4 :     -       -             -   -   -               SP5 : -   -   -   -   -                 -                
About this scheme ECgene alternative splicing isoforms for ADAM33 13 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000444535 ENST00000358035 ENST00000360630 ENST00000428784 ENST00000379861 (uc002wir.1 uc010gba.1 uc010gbb.1 uc002wix.1 uc010zqg.1 uc010zqh.1 uc002wiy.2 )ENST00000466620 (uc002wis.2 ) ENST00000339622 ENST00000439201 ENST00000350009 ENST00000479330 (uc002wiw.1 ) ENST00000483362 (uc002wiq.1 uc002wiv.1 )ENST00000322570 ENST00000356518 (uc002wit.2 uc002wiu.2 )
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Expression for ADAM33 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section ADAM33 expression in normal and diseased human tissues 1 / 2 / 3
5 probe-sets matching ADAM33 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
90688_r_at2 , 3
U95-E
1
1.00
1.00
1.00
1.00
T98467
0.60
1.00
0.82
1
233868_x_at2 , 3
U133-B
1
1.00
1.00
--
--
AL117415
0.20
1.00
0.72
1
232570_s_at2
U133-B
1
1.00
1.00
--
--
--
--
--
--
--
233868_x_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
232570_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
About this table
ADAM33 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ACTGCTGGCC SOURCE GeneReport for Unigene cluster: Hs.173716 UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11 Tissue specificity : Expressed in all tissues, except liver, with high expression in placenta, lung, spleen and veins
SABiosciences Custom PCR Arrays for ADAM33
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Orthologsfor ADAM33 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for ADAM33 gene from 5/8 species (see all 8 )
About this table Species with no ortholog for ADAM33 ENSEMBL Gene Tree for ADAM33 (if available)
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Paralogsfor ADAM33 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for ADAM33 gene ADAM7 2 ADAM19 2 ADAM12 2 ADAM15 2 ADAM28 2
ADAM33 for paralogs About GeneDecksing
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Genomic Variantsfor ADAM33 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 20 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for ADAM33 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for ADAM33: --
QIAGEN SeqTarget long-range PCR primers for resequencing ADAM33
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Disorders & Mutationsfor ADAM33 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
ADAM33 for disorders About GeneDecksing
OMIM: 607114 UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11
Genetic variations in ADAM33 are associated with susceptibility to asthma (ASTHMA) [MIM:600807]. The most common chronic disease affecting children and young adults. It is a complex genetic disorder with a heterogeneous phenotype, largely attributed to the interactions among many genes and between these genes and the environment. It is characterized by recurrent attacks of paroxysmal dyspnea, with weezing due to spasmodic contraction of the bronchi
6 Novoseek disease relationships for ADAM33 gene
About this table 1 PharmGKB disease relationship for ADAM33 gene
Disease
PharmGKB Relations
PubMed IDs for articles supporting these relationships
Asthma GN  12958057
About this table Human Gene Mutation Database (HGMD) : ADAM33 Genetic Association Database (GAD): ADAM33 Human Genome Epidemiology (HuGE) Navigator: ADAM33 (50 documents) Export disorders and mutations for ADAM33 gene to outside databases
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Medical Newsfor ADAM33 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor ADAM33 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/90 PubMed articles for ADAM33 gene, integrated from 7 sources (see all 90 ): (articles sorted by number of sources associating them with ADAM33) Association of the ADAM33 gene with asthma and bronchial hyperresponsiveness. (PubMed id 12110844) 1 , 2 , 4, 7 Van Eerdewegh P.... Keith T.P. (2002) Identification and characterization of novel mouse and human ADAM33s with potential metalloprotease activity. (PubMed id 11814695) 1 , 2 , 3 Yoshinaka T.... Higashiyama S. (2002) ADAM33 polymorphism: association with bronchial hyper-responsiveness in Korean asthmatics. (PubMed id 15196271) 1 , 4, 7 Lee J.H....Shin H.D. (2004) Asthma is associated with single-nucleotide polymorphisms in ADAM33. (PubMed id 14720258) 1 , 4, 7 Werner M....Wjst M. (2004) Association of a disintegrin and metalloprotease 33 (ADAM33) gene with asthma in ethnically diverse populations. (PubMed id 14564349) 1 , 4, 7 Howard T.D....Meyers D.A. (2003) Polymorphisms in a disintegrin and metalloprotease 33 (ADAM33) predict impaired early-life lung function. (PubMed id 15805180) 1 , 4, 7 Simpson A....John S.L. (2005) A disintegrin and metalloprotease 33 polymorphisms and lung function decline in the general population. (PubMed id 15879414) 1 , 4, 7 van Diemen C.C....Boezen H.M. (2005) Asthma severity and genetics in Taiwan. (PubMed id 15986064) 1 , 4, 7 Huang J.L. (2005) Positionally cloned asthma susceptibility gene polymorphisms and disease risk in the British 1958 Birth Cohort. (PubMed id 19237393) 1 , 2 Blakey J.D.... Hall I.P. (2009) ADAM33 haplotypes are associated with asthma in a large Australian population. (PubMed id 16773130) 1 , 2 Kedda M.A....Thompson P.J. (2006)
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External Searches for ADAM33 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing ADAM33 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing ADAM33 gene
(According to HUGE )
About This Section --
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Specialized Databases showing ADAM33 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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NIEHS-SNPs http://egp.gs.washington.edu/data/adam33/
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About This Section Patent Information for ADAM33 gene: Search GeneIP for patents involving ADAM33 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor ADAM33 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for ADAM33
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