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Aliases & Descriptionsfor AKAP11 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions A kinase (PRKA) anchor protein 111 2 AKAP-112 3 AKAP2201 2 3 A-kinase anchor protein 220 kDa2 3 PRKA111 2 3 A-kinase anchor protein 112 KIAA06291 2 3 protein kinase A anchoring protein 112 DKFZp781I121611 2 a kinase anchor protein 220 kDa2 FLJ113041 2 A-kinase anchoring protein, 220kDa2 Protein kinase A-anchoring protein 112 3 AKAP 2203 hAKAP2202 3
Export aliases for AKAP11 gene to outside databases Previous GC identifers: GC13P040846 GC13P036832 GC13P041782 GC13P040644 GC13P041744 GC13P042846
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Summariesfor AKAP11 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for AKAP11 : The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins, which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. The encoded protein is expressed at high levels throughout spermatogenesis and in mature sperm. It binds the RI and RII subunits of PKA in testis. It may serve a function in cell cycle control of both somatic cells and germ cells in addition to its putative role in spermatogenesis and sperm function. (provided by RefSeq) UniProtKB/Swiss-Prot: AKA11_HUMAN, Q9UKA4 Function : Binds to type II regulatory subunits of protein kinase A and anchors/targets themGene Wiki entry for AKAP11
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Genomic Viewsfor AKAP11 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the AKAP11 gene promoter: GATA-1 Max1 c-Myc MyoD Pbx1a RFX1 USF1 ATF POU3F1 RORalpha1 Other transcription factors Search SABiosciences Chromatin IP Primers for AKAP11 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for AKAP11
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 13q14.11 Ensembl cytogenetic band: 13q14.11 HGNC cytogenetic band: 13q AKAP11 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 13 GeneLoc Exon Structure
GeneLoc location for GC13P023649: view genomic region
(about GC identifiers )
Start:
23,649,570 bp from pter
End:
23,700,688 bp from pter
Size:
51,119 bases
Orientation:
plus strand
1 alternative location : Chr 13+ 42,846,289-42,897,396
RefSeq DNA sequence: NC_000013.10 NT_024524.14
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Proteinsfor AKAP11 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: AKA11_HUMAN, Q9UKA4 (See
protein sequence )Recommended Name: A-kinase anchor protein 11 Size : 1901 amino acids; 210512 Da
Subcellular location : Cytoplasm. Cytoplasm, cytoskeleton, centrosome. Note=Cytoplasmic in premeiotic pachytenespermatocytes and in the centrosome of developing postmeiotic germ cells, while a midpiece/centrosome localization was found in elongating spermatocytes and mature sperm
Sequence caution : Sequence=BAA92117.1; Type=Erroneous initiation;
Secondary accessions : O75124 Q9NUK7Explore the universe of human proteins at neXtProt for AKAP11: NX_Q9UKA4 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_057332.1 ENSEMBL proteins: ENSP00000025301 Human Recombinant Proteins 3 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
About this table
AKAP11 for ontologies About GeneDecksing Antibodies for AKAP11: Assays for AKAP11:
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Protein
Domains/ Familiesfor AKAP11 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
AKAP11 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q9UKA4 ProtoNet protein and cluster: Q9UKA4
1 Blocks protein family : IPB008382 A-kinase anchor 110 kDa UniProtKB/Swiss-Prot: AKA11_HUMAN, Q9UKA4 Domain : RII-alpha binding site, predicted to form an amphipathic helix, could participate in protein-proteininteractions with a complementary surface on the R-subunit dimer Similarity : Belongs to the AKAP110 family
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Gene Functionfor AKAP11 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: AKA11_HUMAN, Q9UKA4 Function : Binds to type II regulatory subunits of protein kinase A and anchors/targets them
Genatlas biochemistry entry for AKAP11 :A kinase (PRKA,regulating subunit RIIA) anchor protein 11,expressed in brain,related to rat A kinase anchoring protein AKAP220 3 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
AKAP11 for ontologies About GeneDecksing
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Pathways & Interactionsfor AKAP11 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
AKAP11 for pathways About GeneDecksing 1 Millipore Pathway for AKAP11 3 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for AKAP11 SABiosciences Custom Pathway-Focused PCR Arrays for AKAP11 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for AKAP11 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for AKAP11 3 Interacting proteins for AKAP11 (ENSP00000025301 3 Q9UKA4 1 ) via UniProtKB, MINT, and/or STRING About this table 1 Gene Ontology (GO) biological process term (GO ID links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007243 intracellular protein kinase cascade
TAS 10209101
About this table
AKAP11 for ontologies About GeneDecksing
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Drugs & Compoundsfor AKAP11 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for AKAP11
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Transcriptsfor AKAP11 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for AKAP11 gene: NM_016248.2
Additional cDNA sequence: AB014529.2 AF176555.1 AK002166.1 AK074384.1 CR627087.1
9 DOTS entries : DT.114752 DT.100023768 DT.100704976 DT.100769091 DT.434994 DT.120776864 DT.120776877 DT.120776881
DT.95223295 24/156 AceView cDNA sequences (see all 156 ):
AI367927 CB266408 AA112737 AA809424 BU620731 AA837616 BU167169 BP368267 BM460367 BX483248 T32813 BM727557 BM452941 BX283776 AI357298 AA463313 F37180 AK002166 AI039073 BQ228514 BP339922 AA810908 BQ719874 AI573202
highest scoring ESTs for AKAP11 :AA130296 AA215462 AA215463 AA463313 AA478296 AA502379 AA810908 AA811457 AA862480 AA971446 Unigene Cluster for AKAP11:
A kinase (PRKA) anchor protein 11 Hs.105105 [show with all ESTs ] Unigene Representative Sequence: AF176555 GeneLoc Exon Structure 5/9 Alternative Splicing Database (ASD) splice patterns (SP) for AKAP11 (see all 9 ) ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16a · 16b ^ 17 ^ 18a · 18b · 18c SP1 :     -   -                                             SP2 :       -                                             SP3 :       -   -                                           SP4 :                                       -             SP5 :                                                  
About this scheme ECgene alternative splicing isoforms for AKAP11 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000025301 (uc001uys.1 )
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Expression for AKAP11 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section AKAP11 expression in normal and diseased human tissues 1 / 2 / 3
6 probe-sets matching AKAP11 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
34657_at2 , 3
U95-A
1
1.00
1.00
0.77
1.34
AB014529
0.80
1.00
0.91
1
43903_at2 , 3
U95-B
1
0.44
1.00
0.03
0.67
R63925
0.80
1.00
0.91
1
203156_at2 , 3
U133-A
1
1.00
1.00
--
--
NM_016248
0.60
1.00
0.82
1
215336_at2 , 3
U133-A
1
0.46
1.00
--
--
AK002166
0.40
1.00
0.76
1
203156_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
215336_at2
U133Plus2
1
0.46
1.00
--
--
--
--
--
--
--
About this table
AKAP11 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTGAATATAT SOURCE GeneReport for Unigene cluster: Hs.105105 Expression variation in blood from EXPOLDB for AKAP11
UniProtKB/Swiss-Prot: AKA11_HUMAN, Q9UKA4 Tissue specificity : Expressed in heart, brain, lung, liver, kidney, testis and ovary. Weakly expressed in skeletalmuscle, pancreas and spleen
SABiosciences Custom PCR Arrays for AKAP11
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Orthologsfor AKAP11 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for AKAP11 gene from 5/9 species (see all 9 )
About this table Species with no ortholog for AKAP11 ENSEMBL Gene Tree for AKAP11 (if available)
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Paralogsfor AKAP11 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for AKAP11 gene SPHKAP 2
AKAP11 for paralogs About GeneDecksing
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Genomic Variantsfor AKAP11 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 13 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for AKAP11 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for AKAP11: --
QIAGEN SeqTarget long-range PCR primers for resequencing AKAP11
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Disorders & Mutationsfor AKAP11 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
AKAP11 for disorders About GeneDecksing
OMIM: 604696 Export disorders and mutations for AKAP11 gene to outside databases
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Medical Newsfor AKAP11 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor AKAP11 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/24 PubMed articles for AKAP11 gene, integrated from 7 sources (see all 24 ): (articles sorted by number of sources associating them with AKAP11) Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PubMed id 9734811) 1 , 2 , 3 Ishikawa K.... Ohara O. (1998) Localization of a novel human A-kinase-anchoring protein, hAKAP220, during spermatogenesis. (PubMed id 10864471) 1 , 2 , 7 Reinton N.... Tasken K. (2000) The DNA sequence and analysis of human chromosome 13. (PubMed id 15057823) 1 , 2 Dunham A.... Ross M.T. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones. (PubMed id 12168954) 1 , 2 Nakajima D.... Nagase T. (2002) Cloning and characterization of a novel A-kinase anchoring protein. AKAP 220, association with testicular peroxisomes. (PubMed id 8621616) 1 , 3 Lester L.B....Scott J.D. (1996) Multiple interactions within the AKAP220 signaling complex contribute to protein phosphatase 1 regulation. (PubMed id 11152471) 1 , 7 Schillace R.V....Scott J.D. (2001) Identification and characterization of myeloid translocation gene 16b as a novel a kinase anchoring protein in T lymphocytes. (PubMed id 11823486) 1 , 7 Schillace R.V.... Carr D.W. (2002) Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. (PubMed id 19413330) 2 Gauci S....Mohammed S. (2009) Twenty bone-mineral-density loci identified by large- scale meta-analysis of genome-wide association studies. (PubMed id 19801982) 1 Rivadeneira F....Uitterlinden A.G. (2009)
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External Searches for AKAP11 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing AKAP11 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing AKAP11 gene
(According to HUGE )
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Specialized Databases showing AKAP11 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for AKAP11 gene: Search GeneIP for patents involving AKAP11 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor AKAP11 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for AKAP11
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