Aliases &
Descriptions
for ANUBL1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| AN1, ubiquitin-like, homolog (Xenopus laevis)1 2 | | AN1-type zinc finger and ubiquitin domain-containing protein 12 | | ZFAND41 2 3 | | zinc finger, AN1-type domain 42 | | FLJ401851 2 | | OTTHUMP000000195072 | | AN1-type zinc finger protein 42 3 | | |
Export aliases for ANUBL1 gene to outside databasesPrevious GC identifers: GC10M045395 GC10M045431 GC10M046111 |
Summaries
for ANUBL1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for ANUBL1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ANUBL1 gene promoter:
c-Myb RFX1 GATA-1 Meis-1 HOXA9B FOXC1 Arnt AhR E47 Tal-1
Other transcription factors
Search SABiosciences Chromatin IP Primers for ANUBL1
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for ANUBL1  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 10q11.22 Ensembl cytogenetic band: 10q11.22 HGNC cytogenetic band: 10q11.22ANUBL1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10M042634: view genomic region
(about GC identifiers)
Start:
|
42,634,888 bp from pter |
End:
|
42,692,337 bp from pter |
Size:
|
57,450 bases |
Orientation:
|
minus strand |
1 alternative location:
| Chr10- 46,111,041-46,168,261 |
RefSeq DNA sequence:- NC_000010.10 NT_033985.7
|
Proteins
for ANUBL1 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
|
UniProtKB/Swiss-Prot: ANUB1_HUMAN, Q86XD8 (See
protein sequence)Recommended Name: AN1-type zinc finger and ubiquitin domain-containing protein 1 Size: 727 amino acids; 80358 Da
Secondary accessions: A8K8V4 B2RAX2 Q5VVY5Explore the universe of human proteins at neXtProt for ANUBL1: NX_Q86XD8
REFSEQ proteins (2 alternative transcripts):
NP_001121796.1 NP_777550.2
ENSEMBL proteins: ENSP00000339484 ENSP00000363491 ENSP00000363496 ENSP00000363490 ENSP00000363486 ENSP00000335586
Human Recombinant Proteins
Antibodies for ANUBL1:
Assays for ANUBL1: |
Protein
Domains/
Families
for ANUBL1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ANUBL1 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q86XD8ProtoNet protein and cluster: Q86XD8 2 Blocks protein families: IPB000058 Zn-finger IPB000626 Ubiquitin domain
UniProtKB/Swiss-Prot: ANUB1_HUMAN, Q86XD8Similarity: Contains 1 AN1-type zinc fingerSimilarity: Contains 1 ubiquitin-like domain |
Gene Function
for ANUBL1 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
|
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view): About this table
ANUBL1 for ontologies About GeneDecksing
|
Pathways & Interactions
for ANUBL1 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SABiosciences Custom Pathway-Focused PCR Arrays for ANUBL1
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ANUBL1
|
Drugs & Compounds
for ANUBL1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for ANUBL1
|
Transcripts
for ANUBL1 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for ANUBL1 gene (2 alternative transcripts): NM_001128324.1 NM_174890.2 Additional cDNA sequence: AF311324.1 AK090704.1 AK097504.1 AK097924.1 AK292420.1 AK292469.1 AK314395.1 BC017591.1 BC045587.1 BC048968.1 22 DOTS entries: DT.40249000 DT.95262980 DT.308642 DT.95162998 DT.95142627 DT.95163001 DT.95245892 DT.312737 DT.312733 DT.99930514 DT.95121328 DT.100787069 DT.100844966 DT.121246834 DT.100787070 DT.121246795 DT.92420829 DT.100740560 DT.100787072 DT.121246824 DT.439167 DT.70101282 24/90 AceView cDNA sequences (see all 90): AA813850 BC045587 BX111939 AA746289 AA908268 AA151557 AI655960 BM795247 AA830491 BQ722041 AW074113 BQ889116 AF311324 AA004749 BC017591 AV691310 BC048968 BU568627 BM976660 BU561503 AV685655 BQ438343 BQ429078 AA251390
 highest scoring ESTs for ANUBL1:AA884833 AF311324 AK090704 AL705422 BC017591 BC045587 BC048968 BG718535 BI461448 BI463771 Unigene Cluster for ANUBL1: AN1, ubiquitin-like, homolog (Xenopus laevis) Hs.89029 [show with all ESTs]Unigene Representative Sequence: NM_174890
GeneLoc Exon Structure
5/19 Alternative Splicing Database (ASD) splice patterns (SP) for ANUBL1 (see all 19)
| ExUns: | 1 | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4a | · | 4b | · | 4c | · | 4d | · | 4e | · | 4f | ^ | 5a | · | 5b | ^ | 6 | ^ | 7a | · | 7b | ^ | 8a | · | 8b | · | 8c | ^ | 9a | · | 9b | ^ | 10 | ^ | 11a | · | 11b | ^ | 12 | ^ | 13a | · |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | - | | - | | - | | - | | | | | | |
| SP2: | | | | | | | | | | | - | | - | | - | | - | | - | | - | | | | | | - | | | | | | | | | | | | - | | - | | - | | - | | - | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | | | | | | | | | | | - | | - | | - | | - | | - | | | | | | |
| SP4: | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | | | | | | | | | | | - | | - | | - | | - | | - | | | | | | |
| SP5: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | - | | | | | |
| ExUns: | 13b | · | 13c | ^ | 14a | · | 14b | · | 14c | · | 14d | ^ | 15 | ^ | 16 | ^ | 17a | · | 17b | ^ | 18a | · | 18b |
|---|
|
| SP1: | | | | | - | | | | - | | - | | | | | | | | - | | | | | | |
| SP2: | | | | | - | | | | - | | - | | | | | | | | - | | | | | | |
| SP3: | | | | | - | | | | - | | - | | | | | | | | - | | | | | | |
| SP4: | | | | | - | | - | | - | | - | | - | | - | | | | - | | | | | | |
| SP5: | | | | | - | | | | - | | - | | | | | | | | - | | | | | |
About this scheme
ECgene alternative splicing isoforms for ANUBL1
10 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000484333 ENST00000344646 ENST00000374371(uc001jco.3) ENST00000374376
ENST00000497028 ENST00000374370 ENST00000374366(uc001jcl.3 uc001jcp.3 uc001jcm.3 uc009xmu.2 uc001jcn.3)
ENST00000495747 ENST00000465407(uc001jcq.2) ENST00000335258(uc001jcr.2)
|
Expression
for ANUBL1 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| ANUBL1 expression in normal and diseased human tissues
1 / 2 / 3 8 probe-sets matching ANUBL1 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 73759_at2, 3
|
U95-E |
1 |
1.00 |
1.00 |
0.88 |
1.07 |
AI655960 |
0.60 |
1.00 |
0.82 |
1 |
| 68821_at2, 3
|
U95-E |
1 |
1.00 |
1.00 |
0.94 |
1.16 |
AI150550 |
0.60 |
1.00 |
0.82 |
1 |
| 82479_at2, 3
|
U95-D |
1 |
0.31 |
1.00 |
0.82 |
0.88 |
AA884833 |
0.80 |
1.00 |
0.91 |
1 |
| 51767_s_at2, 3
|
U95-B |
1 |
0.31 |
1.00 |
0.61 |
0.91 |
AA151557 |
0.40 |
1.00 |
0.76 |
1 |
| 223624_at2, 3
|
U133-B |
1 |
0.91 |
1.00 |
-- |
-- |
AF311324 |
0.80 |
1.00 |
0.91 |
1 |
| 244206_at2, 3
|
U133-B |
1 |
0.55 |
1.00 |
-- |
-- |
AW469676 |
0.60 |
1.00 |
0.82 |
1 |
| 223624_at2
|
U133Plus2 |
1 |
0.91 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
| 244206_at2
|
U133Plus2 |
1 |
0.55 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
ANUBL1 for expression About GeneDecksing
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: ATAGTGTATA
SOURCE GeneReport for Unigene cluster: Hs.89029
SABiosciences Custom PCR Arrays for ANUBL1
|
Orthologs
for ANUBL1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ANUBL1 gene from 5/9 species (see all 9)
| Organism |
Gene |
Locus |
Description |
Human
Similarity |
NCBI accessions |
dog
(Canis familiaris) |
ANUBL11 |
-- |
AN1, ubiquitin-like, homolog (Xenopus laevis) |
87.69(n)
79.63(a) |
477752 XM_534949.2 XP_534949.2 |
chimpanzee
(Pan troglodytes) |
ANUBL11 |
-- |
AN1, ubiquitin-like, homolog (Xenopus laevis) |
99.17(n)
98.24(a) |
466278 XM_521678.2 XP_521678.2 |
cow
(Bos taurus) |
ANUBL11 |
-- |
AN1, ubiquitin-like, homolog (Xenopus laevis) |
87.7(n)
81.97(a) |
514391 NM_001076851.1 NP_001070319.1 |
rat
(Rattus norvegicus) |
Anubl11 |
-- |
AN1, ubiquitin-like, homolog (Xenopus laevis) |
80.87(n)
73.93(a) |
286998 XM_001059788.1 XP_001059788.1 |
mouse
(Mus musculus) |
Anubl11 , 5 |
6 (53.77 cM)5
|
AN1, ubiquitin-like, homolog (Xenopus laevis)1, 5 |
80.69(n)1
74.07(a)1 |
674921 NM_001081317.11 NP_001074786.11
AK0066935 AK0126395 (see all 10) |
About this table Species with no ortholog for ANUBL1
ENSEMBL Gene Tree for ANUBL1 (if available) |
Paralogs
for ANUBL1 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for ANUBL1 gene
- ZFAND52 ZFAND62
ANUBL1 for paralogs About GeneDecksing
|
Genomic Variants
for ANUBL1 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 10 pos | Sequence | Recs | AA
Chg | Type | More | Recs | Allele
freq | Pop | Total
sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for ANUBL1 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 7 variations for ANUBL1
7 CNVs: 48535 9150 2863 48537 34456 48536 3798 | | QIAGEN SeqTarget long-range PCR primers for resequencing ANUBL1 |
|
Disorders & Mutations
for ANUBL1 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
ANUBL1 for disorders About GeneDecksing
Human Genome Epidemiology (HuGE) Navigator: ANUBL1 (1 document)
Export disorders and mutations for ANUBL1 gene to outside databases
|
Medical News
for ANUBL1 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for ANUBL1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
7 PubMed articles for ANUBL1 gene integrated from 7 sources:
(articles sorted by number of sources associating them with ANUBL1)- The DNA sequence and comparative analysis of human chromosome 10. (PubMed id 15164054)1, 2 Deloukas P.... Rogers J. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Genome-wide association study of hematological and bi ochemical traits in a Japanese population. (PubMed id 20139978)1 Kamatani Y....Kamatani N. (2010)
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)
- A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease. (PubMed id 16385451)1 Grupe A....Goate A. (2006)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for ANUBL1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing ANUBL1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ANUBL1 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ANUBL1 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for ANUBL1 gene:
Search GeneIP for patents involving ANUBL1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ANUBL1 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
|
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| |  | Search Tocris compounds for ANUBL1 |
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