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Aliases & Descriptionsfor BTG3 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase , and/or 9 Nature :405,311-319 and CroW21)About This Section Aliases & Descriptions BTG family, member 31 2 TOB552 ANA1 2 3 5 protein BTG32 TOB52 3 5 MGC89282 Abundant in neuroepithelium area protein2 3 TOFA2 Protein Tob52 3 BTG family member 33 tob551 B-cell translocation gene9 B-cell translocation gene 32
Export aliases for BTG3 gene to outside databases Previous GC identifers: GC21M015630 GC21M017887 GC21M018965
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Summariesfor BTG3 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for BTG3 : The protein encoded by this gene is a member of the BTG/Tob family. This family has structurally related proteins that appear to have antiproliferative properties. This encoded protein might play a role in neurogenesis in the central nervous system. Two transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq) UniProtKB/Swiss-Prot: BTG3_HUMAN, Q14201 Function : Overexpression impairs serum-induced cell cycle progression from the G0/G1 to S phaseGene Wiki entry for BTG3
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Genomic Viewsfor BTG3 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences , Whole Chromsome Sequence According to
Nature (Cited Here with Permission) :405,311-319 and CroW21)About This Section
GC21M004351:
GeneLoc
Nature :405,311-319
Start:
4,351,708 bp from pter
4,630,458 bp from centromere
End:
4,371,005 bp from pter
4,649,509 bp from centromere
Size:
19,298 bases
19,052 bases
Orientation:
minus strand
minus strand
1 alternative location : Chr 21- 18,965,971-18,985,265
RefSeq DNA sequence: NC_000021.8 NT_011512.11
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Proteinsfor BTG3 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: BTG3_HUMAN, Q14201 (See
protein sequence )Recommended Name: Protein BTG3 Size : 252 amino acids; 29116 Da
Developmental stage : Expression is cell cycle dependent with the highest levels at the end of G1 phase, peaking at theG1-S transition
Secondary accessions : Q53XV1 Q96ET7Alternative splicing : 2 isoforms : Q14201-1 Q14201-2 Explore the universe of human proteins at neXtProt for BTG3: NX_Q14201 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001124386.1 NP_006797.3 ENSEMBL proteins: ENSP00000413799 ENSP00000284879 ENSP00000344609 Human Recombinant Proteins 1 Gene Ontology (GO) cellular component term (GO ID links to tree view) :
About this table
BTG3 for ontologies About GeneDecksing Antibodies for BTG3: Assays for BTG3:
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Protein
Domains/ Familiesfor BTG3 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
BTG3 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q14201 ProtoNet protein and cluster: Q14201
1 Blocks protein family : IPB002087 Anti-proliferative protein UniProtKB/Swiss-Prot: BTG3_HUMAN, Q14201 Similarity : Belongs to the BTG family
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Gene Functionfor BTG3 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: BTG3_HUMAN, Q14201 Function : Overexpression impairs serum-induced cell cycle progression from the G0/G1 to S phase
Genatlas biochemistry entry for BTG3 :B cell transcription gene 3,antiproliferative,predominantly expressed in ovary,testis,prostate,thymus,lung,putatively involved in neurogenesis in the central nervous system,Tob/BTG1 family Animal Models: 2 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Btg3) :
BTG3 for phenotypes About GeneDecksing
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Pathways & Interactionsfor BTG3 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section SABiosciences Custom Pathway-Focused PCR Arrays for BTG3 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for BTG3 2 Interacting proteins for BTG3 (Q14201 2 ) via UniProtKB, MINT, and/or STRING About this table 3 Gene Ontology (GO) biological process terms (GO ID links to tree view) :
About this table
BTG3 for ontologies About GeneDecksing
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Drugs & Compoundsfor BTG3 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for BTG3
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Transcriptsfor BTG3 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for BTG3 gene (2 alternative transcripts): NM_001130914.1 NM_006806.4
Additional cDNA sequence: AK289408.1 BC011957.1 BT007276.1 CR457061.1 CR590787.1 CR593770.1 CR598696.1 CR600061.1 CR602342.1 CR604425.1 CR607894.1 CR608349.1 CR618065.1 CR618737.1 CR620760.1 D64110.1
10 DOTS entries : DT.215678 DT.100757082 DT.100814202 DT.100814204 DT.40242889 DT.97846043 DT.121139656 DT.100028740
DT.91820940 DT.95174003 10 AceView cDNA sequences :
BX101397 AI648620 BU674227 BC028229 AI830363 CB960723 AW665615 BG255148 BX404773 BI912970
highest scoring ESTs for BTG3 :D64110 AL523247 BC011957 BE896159 BE906747 BG675997 BG743348 AA039702 AA398442 AA620290 Unigene Cluster for BTG3:
BTG family, member 3 Hs.473420 [show with all ESTs ] Unigene Representative Sequence: NM_001130914 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for BTG3 (see all 7 ) ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c · 4d ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9a · 9b · 9c SP1 :       -   -         -       -             SP2 :                 -       -             SP3 :                 -     -   -             SP4 :                                   SP5 :                 -   -   -   -            
About this scheme ECgene alternative splicing isoforms for BTG3 6 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000457956 ENST00000464058 ENST00000496601 ENST00000348354 (uc002ykk.2 )ENST00000339775 (uc002ykl.2 ) ENST00000471860
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Expression for BTG3 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section BTG3 expression in normal and diseased human tissues 1 / 2 / 3
9 probe-sets matching BTG3 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
37218_at2 , 3
U95-A
1
1.00
1.00
1.00
1.00
D64110
1.00
1.00
1.00
1
32568_at*2 , 3
U95-A
1
--
--
0.32
0.21
AL049332
0.60
1.00
0.82
1
205548_s_at2 , 3
U133-A
1
1.00
1.00
--
--
NM_006806
0.60
1.00
0.82
1
213134_x_at2 , 3
U133-A
1
1.00
1.00
--
--
AI765445
0.60
1.00
0.82
1
215425_at*2 , 3
U133-A
NULL
0.00
0.00
--
--
AL049332
0.60
1.00
0.82
1
205548_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
213134_x_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
1556213_a_at*2
U133Plus2
NULL
0.00
0.00
--
--
--
--
--
--
--
215425_at*2
U133Plus2
NULL
0.00
0.00
--
--
--
--
--
--
--
About this table
BTG3 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAGTTGCAAA SOURCE GeneReport for Unigene cluster: Hs.473420 Expression variation in blood from EXPOLDB for BTG3
UniProtKB/Swiss-Prot: BTG3_HUMAN, Q14201 Tissue specificity : Ubiquitous. High expression in the ventricular zone of the developing central nervous system. Highin ovary, testis, prostate, thymus and lung
SABiosciences Custom PCR Arrays for BTG3
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Orthologsfor BTG3 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for BTG3 gene from 5/8 species (see all 8 )
About this table Species with no ortholog for BTG3 ENSEMBL Gene Tree for BTG3 (if available)
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Paralogsfor BTG3 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for BTG3 gene BTG4 2 TOB1 2 BTG1 2 TOB2 2 BTG2 2
BTG3 for paralogs About GeneDecksing
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Genomic Variantsfor BTG3 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 21 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for BTG3 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for BTG3: --
QIAGEN SeqTarget long-range PCR primers for resequencing BTG3
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Disorders & Mutationsfor BTG3 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
BTG3 for disorders About GeneDecksing
OMIM: 605674 1 Novoseek disease relationship for BTG3 gene
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
8.26
3
19221000 (2), 19885928 (1)
About this table Export disorders and mutations for BTG3 gene to outside databases
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Medical Newsfor BTG3 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor BTG3 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/17 PubMed articles for BTG3 gene, integrated from 7 sources (see all 17 ): (articles sorted by number of sources associating them with BTG3) ANA, a novel member of Tob/BTG1 family, is expressed in the ventricular zone of the developing central nervous system. (PubMed id 9632145) 1 , 2 , 3 Yoshida Y.... Yamamoto T. (1998) Cloning of the mouse BTG3 gene and definition of a new gene family (the BTG family) involved in the negative control of the cell cycle. (PubMed id 9067576) 1 , 2 , 7 Guehenneux F....Rouault J.-P. (1997) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Association of ANA, a member of the antiproliferative Tob family proteins, with a Caf1 component of the CCR4 transcriptional regulatory complex. (PubMed id 11429045) 1 , 7 Yoshida Y....Yamamoto T. (2001) BTG3 tumor suppressor gene promoter demethylation, histone modification and cell cycle arrest by genistein in renal cancer. (PubMed id 19221000) 1 , 7 Majid S....Dahiya R. (2009) Methylation-mediated downregulation of the B-cell translocation gene 3 (BTG3) in breast cancer cells. (PubMed id 18590053) 1 Yu J....Patterson D. (2008) The candidate tumor suppressor BTG3 is a transcriptional target of p53 that inhibits E2F1. (PubMed id 17690688) 1 Ou Y.H....Shieh S.Y. (2007) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560) 1 Kimura K.... Sugano S. (2006) A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PubMed id 16713569) 1 Lim J.... Zoghbi H.Y. (2006) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for BTG3 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing BTG3 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing BTG3 gene
(According to HUGE )
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Specialized Databases showing BTG3 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for BTG3 gene: Search GeneIP for patents involving BTG3 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor BTG3 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for BTG3
ELISAs and CLIAs for BTG3
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