Aliases &
Descriptions
for C2orf73 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| chromosome 2 open reading frame 731 2 | | FLJ402981 2 | | OTTHUMP000002006112 | | OTTHUMP000002131152 | | hypothetical protein LOC1298522 | | OTTHUMP000002010542 |
Export aliases for C2orf73 gene to outside databasesPrevious GC identifers: GC02P054411 GC02P054557 |
Summaries
for C2orf73 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for C2orf73 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for C2orf73
Other transcription factors
Search SABiosciences Chromatin IP Primers for C2orf73
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for C2orf73  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 2p16.2 Ensembl cytogenetic band: 2p16.2 HGNC cytogenetic band: 2p16.2C2orf73 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02P054292: view genomic region
(about GC identifiers)
Start:
|
54,292,744 bp from pter |
End:
|
54,321,407 bp from pter |
Size:
|
28,664 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr2+ 54,557,171-54,610,879 |
RefSeq DNA sequence:- NC_000002.11 NT_022184.15
|
Proteins
for C2orf73 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
|
UniProtKB/Swiss-Prot: CB073_HUMAN, Q8N5S3 (See
protein sequence)Recommended Name: Uncharacterized protein C2orf73 Size: 287 amino acids; 32158 Da
Sequence caution: Sequence=AAH31669.1; Type=Erroneous initiation;
Secondary accessions: A0AV79 A0AV81 Q8N7V4Alternative splicing: 2 isoforms: Q8N5S3-1 Q8N5S3-2 Explore the universe of human proteins at neXtProt for C2orf73: NX_Q8N5S3
REFSEQ proteins: NP_001093866.1
ENSEMBL proteins: ENSP00000417971 ENSP00000389570 ENSP00000385348 ENSP00000325555 ENSP00000381631 ENSP00000403195 ENSP00000396698
Human Recombinant Proteins
Antibodies for C2orf73:
Assays for C2orf73: |
Protein
Domains/
Families
for C2orf73 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: Q8N5S3 |
Gene Function
for C2orf73 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
|
|
Pathways & Interactions
for C2orf73 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SABiosciences Custom Pathway-Focused PCR Arrays for C2orf73
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for C2orf73
|
Drugs & Compounds
for C2orf73 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for C2orf73
|
Transcripts
for C2orf73 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for C2orf73 gene: NM_001100396.1 Additional cDNA sequence: AK097617.1 BC031669.1 BC126244.1 BC126246.1 BC144191.1 BC144192.1 7 DOTS entries: DT.408208 DT.100744974 DT.100744975 DT.121021734 DT.40204091 DT.95244748 DT.97802057 24/44 AceView cDNA sequences (see all 44): AA904958 BX280544 BX106408 AW197634 BU076308 AA405181 AA701000 AA405932 BE502290 AW182832 AW664734 CA503196 AL706411 NM_173486 AK097617 AI656714 BC031669 AI207010 AW296341 BI519978 AW003924 AA769980 AW296137 AW002506 Unigene Cluster for C2orf73: Chromosome 2 open reading frame 73 Hs.269546 [show with all ESTs]Unigene Representative Sequence: NM_001100396
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for C2orf73
| ExUns: | 1a | · | 1b | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | · | 5d |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | | | | | |
| SP2: | | | | | - | | - | | | | | | | | | | | | | | |
| SP3: | | | | | | | - | | | | | | | | | | | | | | |
| SP4: | | | | | | | - | | | | - | | | | | | | | | |
About this scheme
ECgene alternative splicing isoforms for C2orf73
8 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000486488 ENST00000447328 ENST00000405749 ENST00000491538 ENST00000317627(uc002rxs.1 uc010yos.1)
ENST00000398634(uc002rxt.1 uc010yor.1) ENST00000414747 ENST00000426914
|
Expression
for C2orf73 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| C2orf73 expression in normal and diseased human tissues
1 / 2 5 probe-sets matching C2orf73 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 55552_r_at2
|
U95-B |
1 |
1.00 |
1.00 |
0.78 |
0.73 |
-- |
-- |
-- |
-- |
-- |
| 52355_g_at2
|
U95-B |
1 |
1.00 |
1.00 |
0.79 |
1.47 |
-- |
-- |
-- |
-- |
-- |
| 52352_at2
|
U95-B |
1 |
1.00 |
1.00 |
0.85 |
0.83 |
-- |
-- |
-- |
-- |
-- |
| 231081_at2
|
U133-B |
1 |
1.00 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
| 231081_at2
|
U133Plus2 |
1 |
1.00 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
C2orf73 for expression About GeneDecksing
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: CCCCAGCACT
SOURCE GeneReport for Unigene cluster: Hs.269546
SABiosciences Custom PCR Arrays for C2orf73
|
Orthologs
for C2orf73 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for C2orf73 gene from 4 species
About this table Species with no ortholog for C2orf73
ENSEMBL Gene Tree for C2orf73 (if available) |
Paralogs
for C2orf73 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| -- |
Genomic Variants
for C2orf73 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 2 pos | Sequence | Recs | AA
Chg | Type | More | Recs | Allele
freq | Pop | Total
sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for C2orf73 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 10 variations for C2orf73
10 CNVs: 44031 89660 67788 58990 78548 39251 43409 22585 97857 61770 | | QIAGEN SeqTarget long-range PCR primers for resequencing C2orf73 |
|
Disorders & Mutations
for C2orf73 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Medical News
for C2orf73 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for C2orf73 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
3 PubMed articles for C2orf73 gene integrated from 7 sources:
(articles sorted by number of sources associating them with C2orf73)- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2, 3 Ota T.... Sugano S. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for C2orf73 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing C2orf73 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing C2orf73 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing C2orf73 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for C2orf73 gene:
Search GeneIP for patents involving C2orf73
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for C2orf73 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
|
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| |  | Search Tocris compounds for C2orf73 |
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