Aliases &
Descriptions
for CEACAM16 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| carcinoembryonic antigen-related cell adhesion molecule 161 2 | | Carcinoembryonic antigen-like 22 3 | | CEAL22 3 | | carcinoembryonic antigen like-2 protein2 |
Export aliases for CEACAM16 gene to outside databasesPrevious GC identifers: GC19P049893 GC19P045202 |
Summaries
for CEACAM16 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
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-- |
Genomic Views
for CEACAM16 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the CEACAM16 gene promoter:
Bach2 Lmo2 AP-4 ER-alpha NF-kappaB1 NF-kappaB NF-kappaB2 GATA-1 Bach1 c-Jun
Other transcription factors
Search SABiosciences Chromatin IP Primers for CEACAM16
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 19q13.32 Ensembl cytogenetic band: 19q13.32 HGNC cytogenetic band: 19q13.31CEACAM16 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19P041634: view genomic region
(about GC identifiers)
Start:
|
41,634,688 bp from pter |
End:
|
41,646,253 bp from pter |
Size:
|
11,566 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr19+ 45,202,492-45,213,986 |
RefSeq DNA sequence:- NC_000019.9 NT_011109.16
|
Proteins
for CEACAM16 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
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UniProtKB/Swiss-Prot: CEA16_HUMAN, Q2WEN9 (See
protein sequence)Recommended Name: Carcinoembryonic antigen-related cell adhesion molecule 16 precursor Size: 484 amino acids; 52681 Da
Subcellular location: Membrane; Single-pass type I membrane proteinExplore the universe of human proteins at neXtProt for CEACAM16: NX_Q2WEN9
REFSEQ proteins: NP_001034302.2
ENSEMBL proteins: ENSP00000385576 ENSP00000379974
Human Recombinant Proteins
2 Gene Ontology (GO) cellular component terms (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0016020 | membrane |
IEA | -- | | GO:0016021 | integral to membrane |
IEA | -- |
About this table
CEACAM16 for ontologies About GeneDecksing
Antibodies for CEACAM16:
Assays for CEACAM16: |
Protein
Domains/
Families
for CEACAM16 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
CEACAM16 for domains About GeneDecksing
5 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q2WEN9ProtoNet protein and cluster: Q2WEN9 UniProtKB/Swiss-Prot: CEA16_HUMAN, Q2WEN9Similarity: Belongs to the immunoglobulin superfamily. CEA familySimilarity: Contains 2 Ig-like C2-type (immunoglobulin-like) domains |
Gene Function
for CEACAM16 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
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|
|
Pathways & Interactions
for CEACAM16 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
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|
SABiosciences Custom Pathway-Focused PCR Arrays for CEACAM16
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for CEACAM16
|
Drugs & Compounds
for CEACAM16 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for CEACAM16
|
Transcripts
for CEACAM16 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for CEACAM16 gene: NM_001039213.2 Additional cDNA sequence: BC144608.1 EU021223.1 1 DOTS entry: DT.91787861 1 AceView cDNA sequence: BF589367
 highest scoring ESTs for CEACAM16:BF589367 DV080601 DV080602 NM_001039213 Unigene Cluster for CEACAM16: Carcinoembryonic antigen-related cell adhesion molecule 16 Hs.456381 [show with all ESTs]Unigene Representative Sequence: NM_001039213
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000405314(uc010xxd.1) ENST00000396750(uc002ozq.2)
|
Expression
for CEACAM16 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| CEACAM16 expression in normal and diseased human tissues
1 Data from GNF BioGPS
About these images
About these images
CGAP SAGE TAG: TATTGCGAAG
SOURCE GeneReport for Unigene cluster: Hs.456381
SABiosciences Custom PCR Arrays for CEACAM16
|
Orthologs
for CEACAM16 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CEACAM16 gene from 4 species
About this table Species with no ortholog for CEACAM16
ENSEMBL Gene Tree for CEACAM16 (if available) |
Paralogs
for CEACAM16 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for CEACAM16 gene
- PSG92 PSG82 CEACAM42 CEACAM52 PSG112 CEACAM72 PSG32 CEACAM212
- PSG12 PSG52 PSG62 CEACAM12 CEACAM82 CEACAM62 PSG22 CEACAM182
- PSG42 CEACAM32
CEACAM16 for paralogs About GeneDecksing
|
Genomic Variants
for CEACAM16 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 19 pos | Sequence | Recs | AA
Chg | Type | More | Recs | Allele
freq | Pop | Total
sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for CEACAM16 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 2 variations for CEACAM16
2 CNVs: 0221 30910 | | QIAGEN SeqTarget long-range PCR primers for resequencing CEACAM16 |
|
Disorders & Mutations
for CEACAM16 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
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| -- |
Medical News
for CEACAM16 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for CEACAM16 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
2 PubMed articles for CEACAM16 gene integrated from 7 sources:
(articles sorted by number of sources associating them with CEACAM16)- Identification of a novel group of evolutionarily conserved members within the rapidly diverging murine Cea family. (PubMed id 16139472)1 Zebhauser R....Zimmermann W. (2005)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for CEACAM16 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing CEACAM16 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing CEACAM16 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CEACAM16 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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|
|
About This Section
| Patent Information for CEACAM16 gene:
Search GeneIP for patents involving CEACAM16
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for CEACAM16 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
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