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Aliases & Descriptionsfor DNAJA2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions DnaJ (Hsp40) homolog, subfamily A, member 21 2 RDJ22 CPR31 2 3 5 dnaJ homolog subfamily A member 22 HIRIP41 2 3 HIRA interacting protein 42 DNAJ1 2 cell cycle progression 3 protein2 DNJ31 2 DJA22 Renal carcinoma antigen NY-REN-142 3 PRO30152 Cell cycle progression restoration gene 3 protein2 3 Dj33 HIRA-interacting protein 42 3 Dnj33 DJ32 5
Export aliases for DNAJA2 gene to outside databases Previous GC identifers: GC16M037401 GC16M046931 GC16M046730 GC16M046771 GC16M045547
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Summariesfor DNAJA2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for DNAJA2 : The protein encoded by this gene belongs to the evolutionarily conserved DNAJ/HSP40 family of proteins, which regulate molecular chaperone activity by stimulating ATPase activity. DNAJ proteins may have up to 3 distinct domains: a conserved 70-amino acid J domain, usually at the N terminus; a glycine/phenylalanine (G/F)-rich region; and a cysteine-rich domain containing 4 motifs resembling a zinc finger domain. The product of this gene works as a cochaperone of Hsp70s in protein folding and mitochondrial protein import in vitro. (provided by RefSeq) UniProtKB/Swiss-Prot: DNJA2_HUMAN, O60884 Function : Co-chaperone of Hsc70Gene Wiki entry for DNAJA2
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Genomic Viewsfor DNAJA2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the DNAJA2 gene promoter: COUP-TF1 HNF-4alpha2 PPAR-gamma2 PPAR-gamma1 NF-E2 NF-E2 p45 ATF Meis-1 HOXA9B Lmo2 Other transcription factors Search SABiosciences Chromatin IP Primers for DNAJA2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for DNAJA2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 16q12.1 Ensembl cytogenetic band: 16q12.1 HGNC cytogenetic band: 16q12.1 DNAJA2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure
GeneLoc location for GC16M032879: view genomic region
(about GC identifiers )
Start:
32,879,590 bp from pter
End:
32,897,952 bp from pter
Size:
18,363 bases
Orientation:
minus strand
1 alternative location : Chr 16- 46,989,274-47,007,625
RefSeq DNA sequence: NC_000016.9 NT_010498.15
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Proteinsfor DNAJA2 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: DNJA2_HUMAN, O60884 (See
protein sequence )Recommended Name: DnaJ homolog subfamily A member 2 Size : 412 amino acids; 45746 Da
Subcellular location : Membrane; Lipid-anchor (Potential)
Secondary accessions : B2R7L7 O14711Explore the universe of human proteins at neXtProt for DNAJA2: NX_O60884 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_005871.1 ENSEMBL proteins: ENSP00000314030 Human Recombinant Proteins 1 Gene Ontology (GO) cellular component term (GO ID links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0016020 membrane
IEA --
About this table
DNAJA2 for ontologies About GeneDecksing Antibodies for DNAJA2: Assays for DNAJA2:
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Protein
Domains/ Familiesfor DNAJA2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
DNAJA2 for domains About GeneDecksing 5/8 InterPro domains/families (see all 8 ):
Graphical View of Domain Structure for InterPro Entry O60884 ProtoNet protein and cluster: O60884
2 Blocks protein families : IPB001305 DnaJ central domain (CXXCXGXG) IPB003095 DnaJ protein family signature UniProtKB/Swiss-Prot: DNJA2_HUMAN, O60884 Similarity : Contains 1 CR-type zinc fingerSimilarity : Contains 1 J domain
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Gene Functionfor DNAJA2 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: DNJA2_HUMAN, O60884 Function : Co-chaperone of Hsc70
4 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
DNAJA2 for ontologies About GeneDecksing
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Pathways & Interactionsfor DNAJA2 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
DNAJA2 for pathways About GeneDecksing 1 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathway for DNAJA2 1 Kegg Pathway (Kegg details for DNAJA2) : hsa04141 Protein processing in endoplasmic reticulum
SABiosciences Pathway-Focused PCR Arrays including DNAJA2 : PAHS-076A PAHS-3401A Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for DNAJA2 Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for DNAJA2 5/31 Interacting proteins for DNAJA2 (O60884 2 ) via UniProtKB, MINT, and/or STRING (see all 31 )About this table 3 Gene Ontology (GO) biological process terms (GO ID links to tree view) :
About this table
DNAJA2 for ontologies About GeneDecksing
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Drugs & Compoundsfor DNAJA2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section
DNAJA2 for compounds About GeneDecksing Browse Tocris compounds for DNAJA2 3 Novoseek chemical compound relationships for DNAJA2 gene
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Transcriptsfor DNAJA2 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for DNAJA2 gene: NM_005880.3
Additional cDNA sequence: AF011793.1 AF088046.1 AJ001309.1 AK313031.1 BC013044.2 BC015809.2 CR600360.1 CR616567.1 CR621166.1 CR622758.1 Y13350.1
9 DOTS entries : DT.407476 DT.100809136 DT.100809135 DT.100809126 DT.100809132 DT.100809133 DT.87016563 DT.100809131
DT.120676773 24/300 AceView cDNA sequences (see all 300 ):
BM930354 BE000270 AI273537 BQ774167 CR622758 BU674653 AU139290 BC015809 AF088046 BC013044 CD678299 BX955324 AW057513 BQ645095 AW385136 BU173271 BU192281 BP346017 BE385295 BG250409 AA677397 CN484407 CR621166 BQ774716
highest scoring ESTs for DNAJA2 :AA307662 AJ001309 AL558670 AL603007 AL702679 AL702805 AL711727 AU099048 AU133833 AV657203 Unigene Cluster for DNAJA2:
DnaJ (Hsp40) homolog, subfamily A, member 2 Hs.368078 [show with all ESTs ] Unigene Representative Sequence: NM_005880 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for DNAJA2 (see all 6 ) ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b · 3c · 3d ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7a · 7b ^ 8a · 8b ^ 9a · 9b ^ 10 SP1 :         -                                 SP2 :                               -       -     SP3 :         -       -   -   -                       SP4 :                                         SP5 :                                        
About this scheme ECgene alternative splicing isoforms for DNAJA2 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000317089 (uc002eeo.2 uc002eep.2 )
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Expression for DNAJA2 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section DNAJA2 expression in normal and diseased human tissues 1 / 2 / 3
6 probe-sets matching DNAJA2 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
34201_at2 , 3
U95-A
1
0.50
1.00
0.97
0.87
Y13350
0.60
1.00
0.82
1
51644_at2 , 3
U95-B
1
0.31
1.00
0.98
1.13
AI560867
0.40
1.00
0.76
1
209157_at2 , 3
U133-A
1
1.00
1.00
--
--
AF011793
0.60
1.00
0.82
1
226994_at2 , 3
U133-B
1
0.55
1.00
--
--
AW057513
0.40
1.00
0.76
1
209157_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
226994_at2
U133Plus2
1
0.55
1.00
--
--
--
--
--
--
--
About this table
DNAJA2 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GAAAAAAATG SOURCE GeneReport for Unigene cluster: Hs.368078 Expression variation in blood from EXPOLDB for DNAJA2
SABiosciences Expression via Pathway-Focused PCR Arrays including DNAJA2 : PAHS-076A PAHS-3401A
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Orthologsfor DNAJA2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for DNAJA2 gene from 5/23 species (see all 23 )
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
DNAJA21
--
DnaJ (Hsp40) homolog, subfamily A, member 2
94.99(n) 100(a)
478143 XM_535319.2 XP_535319.2
chimpanzee (Pan troglodytes)
DNAJA21
--
DnaJ (Hsp40) homolog, subfamily A, member 2
99.84(n) 100(a)
473274 XM_528644.2 XP_528644.2
cow (Bos taurus)
DNAJA21
--
DnaJ (Hsp40) homolog, subfamily A, member 2
93.93(n) 99.51(a)
360006 NM_001040491.1 NP_001035581.1
rat (Rattus norvegicus)
Dnaja21
--
DnaJ (Hsp40) homolog, subfamily A, member 2
92.39(n) 99.51(a)
84026 NM_032079.2 NP_114468.2
mouse (Mus musculus)
Dnaja21 , 5
8 (41.61 cM) 5
DnaJ (Hsp40) homolog, subfamily A, member 21, 5
92.56(n) 1 99.51(a) 1
56445 1 NM_019794.2 1 NP_062768.1 1 AA107471 5 AA763945 5 (see all 19 )
About this table Species with no ortholog for DNAJA2 ENSEMBL Gene Tree for DNAJA2 (if available)
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Paralogsfor DNAJA2 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for DNAJA2 gene DNAJA1 2 DNAJA4 2 DNAJB11 2
DNAJA2 for paralogs About GeneDecksing
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Genomic Variantsfor DNAJA2 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 16 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for DNAJA2 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for DNAJA2: --
QIAGEN SeqTarget long-range PCR primers for resequencing DNAJA2
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Disorders & Mutationsfor DNAJA2 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
DNAJA2 for disorders About GeneDecksing
OMIM: 611322 2 Novoseek disease relationships for DNAJA2 gene
About this table Export disorders and mutations for DNAJA2 gene to outside databases
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Medical Newsfor DNAJA2 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor DNAJA2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/52 PubMed articles for DNAJA2 gene, integrated from 7 sources (see all 52 ): (articles sorted by number of sources associating them with DNAJA2) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 1 , 2 Olsen J.V....Mann M. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) A tagging-via-substrate technology for detection and proteomics of farnesylated proteins. (PubMed id 15308774) 1 , 2 Kho Y.... Zhao Y. (2004) Human DnaJ homologs dj2 and dj3, and bag-1 are positive cochaperones of hsc70. (PubMed id 10816573) 1 , 2 Terada K. and Mori M. (2000) Mammalian HSP40/DNAJ homologs: cloning of novel cDNAs and a proposal for their classification and nomenclature. (PubMed id 11147971) 1 , 3 Ohtsuka K. and Hata M. (2000) Antigens recognized by autologous antibody in patients with renal- cell carcinoma. (PubMed id 10508479) 1 , 2 Scanlan M.J....Old L.J. (1999) Core histones and HIRIP3, a novel histone-binding protein, directly interact with WD repeat protein HIRA. (PubMed id 9710638) 1 , 3 Lorain S.... Lipinski M. (1998) Human CPR (cell cycle progression restoration) genes impart a Far- phenotype on yeast cells. (PubMed id 9383053) 1 , 2 Edwards M.C.... Elledge S.J. (1997) Hsp40 chaperones promote degradation of the HERG pota ssium channel. (PubMed id 19940115) 1 Walker V.E....Shrier A. (2010) Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PubMed id 19690332) 2 Mayya V.... Han D.K. (2009)
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External Searches for DNAJA2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing DNAJA2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing DNAJA2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing DNAJA2 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for DNAJA2 gene: Search GeneIP for patents involving DNAJA2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor DNAJA2 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
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