Aliases &
Descriptions
for FAM90A19 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
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|
| Aliases & Descriptions |
|---|
| family with sequence similarity 90, member A191 2 | | OTTHUMG000001391071 | | putative protein FAM90A18/FAM90A192 | | FAM90A182 |
Export aliases for FAM90A19 gene to outside databasesPrevious GC identifers: GC08U900650 GC08P007649 |
Summaries
for FAM90A19 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
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|
Entrez Gene summary for FAM90A19:
FAM90A19 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multipleduplications and rearrangements (Bosch et al., 2007 (PubMed 17684299)). For background information on the FAM90A genefamily, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).(supplied by OMIM)
|
Genomic Views
for FAM90A19 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
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|
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for FAM90A19
Other transcription factors
Search SABiosciences Chromatin IP Primers for FAM90A19
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 8p23.1 Ensembl cytogenetic band: 8p23.1 HGNC cytogenetic band: 8p23.1FAM90A19 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 8 GeneLoc Exon Structure GeneLoc location for GC08P007613: view genomic region
(about GC identifiers)
Start:
|
7,611,204 bp from pter |
End:
|
7,614,678 bp from pter |
Size:
|
3,475 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr8+ 7,580,613-7,630,062 |
|
Proteins
for FAM90A19 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
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|
UniProtKB/Swiss-Prot: F90AI_HUMAN, A6NE21 (See
protein sequence)Recommended Name: Putative protein FAM90A18/FAM90A19 Size: 464 amino acids; 49680 DaExplore the universe of human proteins at neXtProt for FAM90A19: NX_A6NE21
REFSEQ proteins: NP_001157921.1
ENSEMBL proteins: ENSP00000396357
Human Recombinant Proteins
Antibodies for FAM90A19:
Assays for FAM90A19: |
Protein
Domains/
Families
for FAM90A19 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
FAM90A19 for domains About GeneDecksing
1 InterPro domain/family:Graphical View of Domain Structure for InterPro Entry A6NE21ProtoNet protein and cluster: A6NE21 UniProtKB/Swiss-Prot: F90AI_HUMAN, A6NE21Similarity: Belongs to the FAM90 family |
Gene Function
for FAM90A19 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
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|
2 Gene Ontology (GO) molecular function terms (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0003676 | nucleic acid binding |
IEA | -- | | GO:0008270 | zinc ion binding |
IEA | -- |
About this table
FAM90A19 for ontologies About GeneDecksing
|
Pathways & Interactions
for FAM90A19 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SABiosciences Custom Pathway-Focused PCR Arrays for FAM90A19
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for FAM90A19
|
Drugs & Compounds
for FAM90A19 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for FAM90A19
|
Transcripts
for FAM90A19 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for FAM90A19 gene: NM_001164449.1
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000456457
|
Expression
for FAM90A19 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| FAM90A19 expression in normal and diseased human tissues
Data from GNF BioGPS
About these images
About these images
CGAP SAGE TAG: --
SABiosciences Custom PCR Arrays for FAM90A19
|
Orthologs
for FAM90A19 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for FAM90A19 gene from 3 species
About this table Species with no ortholog for FAM90A19
ENSEMBL Gene Tree for FAM90A19 (if available) |
Paralogs
for FAM90A19 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for FAM90A19 gene
- FAM90A181 2 FAM90A91 2 FAM90A161 2 FAM90A171 2 FAM90A81 2 FAM90A15 FAM90A10 FAM90A141 2
- FAM90A131 2 FAM90A51 2 FAM90A31 2 FAM90A121 2 FAM90A71 2 FAM90A201 2 LOC1002870452 LOC6465082
- FAM90A12 FAM90A232 FAM90A222 FAM90A2P2 FAM90A112
FAM90A19 for paralogs About GeneDecksing
|
Genomic Variants
for FAM90A19 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 26 variations for FAM90A19
15/20 CNVs (see all 20): 36869 82451 8593 34519 70271 31424 7702 9081 95214 52617 0296 32996 38958 70269 95213
6 Inversions: 37307 37304 37308 37305 37306 37303 |
Disorders & Mutations
for FAM90A19 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
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|
FAM90A19 for disorders About GeneDecksing
OMIM: 613053
Export disorders and mutations for FAM90A19 gene to outside databases
|
Medical News
for FAM90A19 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for FAM90A19 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
3 PubMed articles for FAM90A19 gene integrated from 7 sources:
(articles sorted by number of sources associating them with FAM90A19)- Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. (PubMed id 18691976)2 Daub H.... Mann M. (2008)
- Characterization and evolution of the novel gene fami ly FAM90A in primates originated by multiple duplication and rearrangement even ts. (PubMed id 17684299)1 Bosch N....Estivill X. (2007)
- DNA sequence and analysis of human chromosome 8. (PubMed id 16421571)2 Nusbaum C....Lander E.S. (2006)
|
External Searches for FAM90A19 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
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|
|
Genome Databases showing FAM90A19 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing FAM90A19 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing FAM90A19 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
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|
About This Section
| Patent Information for FAM90A19 gene:
Search GeneIP for patents involving FAM90A19
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for FAM90A19 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
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