Aliases &
Descriptions
for GLB1L3 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| galactosidase, beta 1-like 31 2 | | FLJ902311 2 | | OTTHUMP000002057652 | | beta-galactosidase-1-like protein 32 | | galactosidase, beta 1 like 32 | | EC 3.2.1.-3 |
Export aliases for GLB1L3 gene to outside databasesPrevious GC identifers: GC11P133652 GC11P134145 |
Summaries
for GLB1L3 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for GLB1L3 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for GLB1L3
Other transcription factors
Search SABiosciences Chromatin IP Primers for GLB1L3
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 11q25 Ensembl cytogenetic band: 11q25 HGNC cytogenetic band: 11q25GLB1L3 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P130101: view genomic region
(about GC identifiers)
Start:
|
130,101,037 bp from pter |
End:
|
130,144,384 bp from pter |
Size:
|
43,348 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr11+ 134,145,464-134,189,458 |
RefSeq DNA sequence:- NC_000011.9 NT_033899.8
|
Proteins
for GLB1L3 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
|
UniProtKB/Swiss-Prot: GLBL3_HUMAN, Q8NCI6 (See
protein sequence)Recommended Name: Beta-galactosidase-1-like protein 3 Size: 653 amino acids; 74823 Da
Secondary accessions: A6NEM0 A6NN15 Q6P3S3 Q96FF8Alternative splicing: 3 isoforms: Q8NCI6-1 Q8NCI6-2 Q8NCI6-4 Explore the universe of human proteins at neXtProt for GLB1L3: NX_Q8NCI6
REFSEQ proteins: NP_001073876.2
ENSEMBL proteins: ENSP00000386533 ENSP00000374537 ENSP00000397929 ENSP00000396615 ENSP00000299136 ENSP00000388859
Human Recombinant Proteins
1 Gene Ontology (GO) cellular component term (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0009341 | beta-galactosidase complex |
-- | -- |
About this table
GLB1L3 for ontologies About GeneDecksing
Antibodies for GLB1L3:
Assays for GLB1L3: |
Protein
Domains/
Families
for GLB1L3 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
GLB1L3 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q8NCI6ProtoNet protein and cluster: Q8NCI6 UniProtKB/Swiss-Prot: GLBL3_HUMAN, Q8NCI6Similarity: Belongs to the glycosyl hydrolase 35 family |
Gene Function
for GLB1L3 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
|
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
IEA | -- | | GO:0004565 | beta-galactosidase activity |
-- | -- | | GO:0043169 | cation binding |
IEA | -- |
About this table
GLB1L3 for ontologies About GeneDecksing
|
Pathways & Interactions
for GLB1L3 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
GLB1L3 for pathways About GeneDecksing
5/6  Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for GLB1L3 (see all 6)
SABiosciences Custom Pathway-Focused PCR Arrays for GLB1L3
Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for GLB1L3
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for GLB1L3
1 Gene Ontology (GO) biological process term (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005975 | carbohydrate metabolic process |
IEA | -- |
About this table
GLB1L3 for ontologies About GeneDecksing
|
Drugs & Compounds
for GLB1L3 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for GLB1L3
|
Transcripts
for GLB1L3 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for GLB1L3 gene: NM_001080407.2 Additional cDNA sequence: AK074712.1 BC011001.2 BC131702.1 7 DOTS entries: DT.101954563 DT.92053841 DT.100660936 DT.101981068 DT.95089170 DT.100727544 DT.40129379 24/145 AceView cDNA sequences (see all 145): BG386617 BQ899101 AI805064 AI379142 BU173188 AI262635 AA035048 BE382579 BC008326 AI436113 BU168671 BQ678746 BF589594 T07976 BM721777 BM450486 BQ677578 AI553835 AA306370 BC040641 BQ678539 BQ068659 NM_138342 BP377297
 highest scoring ESTs for GLB1L3:BC040605 NM_138416 NM_173581 AK074712 AK124514 BC011001 BC063875 BE798113 AI557246 AW291395 Unigene Cluster for GLB1L3: Galactosidase, beta 1-like 3 Hs.721382 [show with all ESTs]Unigene Representative Sequence: NM_001080407
GeneLoc Exon Structure
9 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000410100(uc009zdf.2 uc001qho.3) ENST00000389887(uc010scs.1 uc010sct.1)
ENST00000486034(uc010scu.1) ENST00000498012 ENST00000455971 ENST00000467068
ENST00000431683 ENST00000299136 ENST00000425777
|
Expression
for GLB1L3 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| GLB1L3 expression in normal and diseased human tissues
1 / 2 2 probe-sets matching GLB1L3 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 1569886_a_at2
|
U133Plus2 |
1 |
1.00 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
| 1562888_at2
|
U133Plus2 |
1 |
0.55 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: TGCTGAGTGG
SOURCE GeneReport for Unigene cluster: Hs.721382
SABiosciences Custom PCR Arrays for GLB1L3
|
Orthologs
for GLB1L3 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for GLB1L3 gene from 4 species
About this table Species with no ortholog for GLB1L3
ENSEMBL Gene Tree for GLB1L3 (if available) |
Paralogs
for GLB1L3 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for GLB1L3 gene
- GLB1L2 GLB1L22 GLB12
GLB1L3 for paralogs About GeneDecksing
|
Genomic Variants
for GLB1L3 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 11 pos | Sequence | Recs | AA
Chg | Type | More | Recs | Allele
freq | Pop | Total
sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for GLB1L3 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 17 variations for GLB1L3
15/17 CNVs (see all 17): 53709 75855 86096 86097 75854 48743 75856 101382 75853 86098 4764 86095 29921 48744 5280 | | QIAGEN SeqTarget long-range PCR primers for resequencing GLB1L3 |
|
Disorders & Mutations
for GLB1L3 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
GLB1L3 for disorders About GeneDecksing
Human Genome Epidemiology (HuGE) Navigator: GLB1L3 (1 document)
Export disorders and mutations for GLB1L3 gene to outside databases
|
Medical News
for GLB1L3 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for GLB1L3 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
5 PubMed articles for GLB1L3 gene integrated from 7 sources:
(articles sorted by number of sources associating them with GLB1L3)- Human chromosome 11 DNA sequence and analysis including novel gene identification. (PubMed id 16554811)1, 2 Taylor T.D....Sakaki Y. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1, 3 Strausberg R.L....Marra M.A. (2002)
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614)1 Rose J.E....Uhl G.R. (2010)
|
External Searches for GLB1L3 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing GLB1L3 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing GLB1L3 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GLB1L3 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for GLB1L3 gene:
Search GeneIP for patents involving GLB1L3
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for GLB1L3 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
|
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