Aliases &
Descriptions
for GOLGA6L9 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
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|
| Aliases & Descriptions |
|---|
| golgin A6 family-like 91 2 | | golgi autoantigen, golgin subfamily a, 6-like 91 2 | | golgi autoantigen, golgin subfamily a, 6D-like2 | | Golgin subfamily A member 6-like protein 92 |
Export aliases for GOLGA6L9 gene to outside databasesPrevious GC identifer: GC15P080512 |
Summaries
for GOLGA6L9 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
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-- |
Genomic Views
for GOLGA6L9 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
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|
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for GOLGA6L9
Other transcription factors
Search SABiosciences Chromatin IP Primers for GOLGA6L9
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 15q25.2 Ensembl cytogenetic band: 15q25.2 HGNC cytogenetic band: 15q25.2GOLGA6L9 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 15 GeneLoc Exon Structure GeneLoc location for GC15P082722: view genomic region
(about GC identifiers)
Start:
|
82,722,185 bp from pter |
End:
|
82,731,587 bp from pter |
Size:
|
9,403 bases |
Orientation:
|
plus strand |
0 alternative location:
|
Proteins
for GOLGA6L9 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
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|
UniProtKB/Swiss-Prot: GG6L9_HUMAN, A6NEM1 (See
protein sequence)Recommended Name: Golgin subfamily A member 6-like protein 9 Size: 432 amino acids; 49096 Da
Sequence caution: Sequence=AAH41854.1; Type=Erroneous initiation;
Secondary accessions: Q8IVV3Alternative splicing: 2 isoforms: A6NEM1-1 A6NEM1-2 Explore the universe of human proteins at neXtProt for GOLGA6L9: NX_A6NEM1
REFSEQ proteins: NP_937824.2
ENSEMBL proteins: ENSP00000300515 ENSP00000341473
Human Recombinant Proteins
Antibodies for GOLGA6L9:
Assays for GOLGA6L9: |
Protein
Domains/
Families
for GOLGA6L9 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: A6NEM1 UniProtKB/Swiss-Prot: GG6L9_HUMAN, A6NEM1Similarity: Belongs to the GOLGA6 family |
Gene Function
for GOLGA6L9 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
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|
|
Pathways & Interactions
for GOLGA6L9 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
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|
SABiosciences Custom Pathway-Focused PCR Arrays for GOLGA6L9
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for GOLGA6L9
|
Drugs & Compounds
for GOLGA6L9 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
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|
 Browse Tocris compounds for GOLGA6L9
|
Transcripts
for GOLGA6L9 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
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REFSEQ mRNAs for GOLGA6L9 gene: NM_198181.2 24/74 AceView cDNA sequences (see all 74): BM698646 BQ638438 AK128268 AW206224 AI860513 BM980122 BM670739 BX509962 BU675923 BM789384 BU685103 BM676751 AW946001 BC066934 AI205783 BG717020 AW195066 AA370753 BU674158 AW946002 AL110434 AI802050 BC041854 BF761039
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000300515(uc002bha.1 uc010blt.2 uc002bhb.3) ENST00000342830
|
Expression
for GOLGA6L9 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| GOLGA6L9 expression in normal and diseased human tissues
Data from GNF BioGPS
About these images
About these images
CGAP SAGE TAG: --
SABiosciences Custom PCR Arrays for GOLGA6L9
|
Orthologs
for GOLGA6L9 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
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|
Orthologs for GOLGA6L9 gene from 1 species
| Organism |
Gene |
Locus |
Description |
Human
Similarity |
NCBI accessions |
chimpanzee
(Pan troglodytes) |
LOC7438601 |
-- |
hypothetical protein LOC743860 |
84.07(n)
76.83(a) |
743860 XM_001148057.1 XP_001148057.1 |
About this table Species with no ortholog for GOLGA6L9
ENSEMBL Gene Tree for GOLGA6L9 (if available) |
Paralogs
for GOLGA6L9 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
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| Paralogs for GOLGA6L9 gene
- LOC7286361 2 LOC647042 LOC642346 LOC643696 LOC161527 ENSG000002203562 ENSG000001886262 GOLGA8E2
- GOLGA8G2 ENSG000002250332 GOLGA8F2 ENSG000002139742 GOLGA8DP2 ENSG000002143942 GOLGA6B2 GOLGA6A2
- ENSG000002053152 GOLGA8J2 LOC6423252 LOC7280472 GOLGA22 ENSG000002326532 GOLGA6L42 LOC4417362
- ENSG000001878122 ENSG000001671412 GOLGA8H2 ENSG000001038322 ENSG000001781152 GOLGA8C2 GOLGA6C2 LOC6436992
- LOC1002892892 ENSG000002499312 GOLGA8B2 GOLGA8A2 GOLGA6L102 LOC6530612 ENSG000002352762 GOLGA6D2
GOLGA6L9 for paralogs About GeneDecksing
|
Genomic Variants
for GOLGA6L9 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
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Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 15 variations for GOLGA6L9
15 CNVs: 77020 30717 87772 77019 77021 30716 3972 72314 72323 87771 87770 2197 72309 7074 0788 |
Disorders & Mutations
for GOLGA6L9 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
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| -- |
Medical News
for GOLGA6L9 gene(Possibly Related Articles in
Doctor's Guide)
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| -- |
Publications
for GOLGA6L9 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
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|
3 PubMed articles for GOLGA6L9 gene integrated from 7 sources:
(articles sorted by number of sources associating them with GOLGA6L9)- Analysis of the DNA sequence and duplication history of human chromosome 15. (PubMed id 16572171)2 Zody M.C....Nusbaum C. (2006)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for GOLGA6L9 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
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Genome Databases showing GOLGA6L9 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing GOLGA6L9 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing GOLGA6L9 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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|
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| Patent Information for GOLGA6L9 gene:
Search GeneIP for patents involving GOLGA6L9
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for GOLGA6L9 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
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