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Aliases & Descriptionsfor JUB gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions jub, ajuba homolog (Xenopus laevis)1 2 MGC155631 2 Ajuba2 protein ajuba2
Export aliases for JUB gene to outside databases Previous GC identifers: GC14M020813 GC14M017228 GC14M021431 GC14M021430 GC14M022510 GC14M023440
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Summariesfor JUB gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: JUB_HUMAN, Q96IF1 Function : Components of cellular adhesives complexes. Contribute to cell fate determination and regulate cellproliferation and differentiation. Involved in the regulation of actin cytoskeleton dynamics and cell migration. Contributes to the linking and/or strengthening of epithelia cell-cell junctions in part by linking adhesive receptors to the actin cytoskeleton. May be involved in signal transduction from cell adhesion sites to the nucleus. Plays a important role in regulation of the kinase activity of AURKA/Aurora-A for mitotic commitment. Is also a component of the IL-1 signaling pathway modulating IL-1-induced NF-kappa-B activation by influencing the assembly and activity of the PRKCZ/SQSTM1/TRAF6 multiprotein signaling complex. Can functions as adapter molecules in the formation of large multiprotein complexes that form on DNA and that influence transcription Gene Wiki entry for JUB
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Genomic Viewsfor JUB gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the JUB gene promoter: NF-kappaB1 Egr-1 GATA-1 NF-1 LUN-1 c-Myb POU2F1 MRF-2 Arnt AhR Other transcription factors Search SABiosciences Chromatin IP Primers for JUB Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for JUB
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 14q11.2 Ensembl cytogenetic band: 14q11.2 HGNC cytogenetic band: 14q11.2 JUB Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 14 GeneLoc Exon Structure
GeneLoc location for GC14M003557: view genomic region
(about GC identifiers )
Start:
3,557,642 bp from pter
End:
3,569,085 bp from pter
Size:
11,444 bases
Orientation:
minus strand
1 alternative location : Chr 14- 23,440,383-23,451,851
RefSeq DNA sequence: NC_000014.8 NT_026437.12
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Proteinsfor JUB gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: JUB_HUMAN, Q96IF1 (See
protein sequence )Recommended Name: Protein ajuba Size : 538 amino acids; 56934 Da
Subunit : Interacts with AURKA/Aurora-A during mitosis and both proteins are phosphorylated as they form a complex.Interacts with CTNNA1/alpha-catenin and with F-actin. Interacts with LATS2 during mitosis and this complex regulates organization of the spindle apparatus through recruitment of gamma-tubulin to the centrosome. Interacts with GRB2 and PIP5K1A (By similarity). Forms a complex with SQSTM1, PRKCZ and TRAF6. Interacts with SLC1A2 (By similarity)
Subcellular location : Cytoplasm, cytoskeleton. Cell membrane. Cell junction. Nucleus. Cytoplasm, cytoskeleton,centrosome. Note=Shuttles between the cytoplasm and the nucleus. Localizes on centrosomes during G2-M phase. Preferentially co-localizes with cadherin-adhesive complexes at sites of cell-cell contacts
Miscellaneous : 'Ajuba' means 'curiosity' in Urdu, an Indian dialectExplore the universe of human proteins at neXtProt for JUB: NX_Q96IF1 Post-translational modifications:
Phosphorylated by LATS2 during mitosis. Phosphorylated by AURKA1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_116265.1 NP_932352.1 ENSEMBL proteins: ENSP00000354491 ENSP00000262713 ENSP00000380543 Human Recombinant Proteins 5/8 Gene Ontology (GO) cellular component terms (GO ID links to tree view) (see all 8 ):
About this table
JUB for ontologies About GeneDecksing Antibodies for JUB: Assays for JUB:
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Protein
Domains/ Familiesfor JUB gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
JUB for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q96IF1 ProtoNet protein and cluster: Q96IF1
1 Blocks protein family : IPB001781 Zn-binding protein UniProtKB/Swiss-Prot: JUB_HUMAN, Q96IF1 Domain : LIM region interacts with CTNNA1. The preLIM region binds directly actin filamentsDomain : LIM-2 and LIM-3 domains mediate the interaction with the N-terminal region of AURKA. The association betweenLATS2 and JUB required the second LIM domain of JUB Similarity : Belongs to the zyxin/ajuba familySimilarity : Contains 3 LIM zinc-binding domains
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Gene Functionfor JUB gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: JUB_HUMAN, Q96IF1 Function : Components of cellular adhesives complexes. Contribute to cell fate determination and regulate cellproliferation and differentiation. Involved in the regulation of actin cytoskeleton dynamics and cell migration. Contributes to the linking and/or strengthening of epithelia cell-cell junctions in part by linking adhesive receptors to the actin cytoskeleton. May be involved in signal transduction from cell adhesion sites to the nucleus. Plays a important role in regulation of the kinase activity of AURKA/Aurora-A for mitotic commitment. Is also a component of the IL-1 signaling pathway modulating IL-1-induced NF-kappa-B activation by influencing the assembly and activity of the PRKCZ/SQSTM1/TRAF6 multiprotein signaling complex. Can functions as adapter molecules in the formation of large multiprotein complexes that form on DNA and that influence transcription
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
JUB for ontologies About GeneDecksing Animal Models: 1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Jub) :
JUB for phenotypes About GeneDecksing
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Pathways & Interactionsfor JUB gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section SABiosciences Custom Pathway-Focused PCR Arrays for JUB SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for JUB 5/8 Interacting proteins for JUB (ENSP00000262713 3 Q96IF1 2 ) via UniProtKB, MINT, and/or STRING (see all 8 )About this table 5/7 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 7 ):
About this table
JUB for ontologies About GeneDecksing
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Drugs & Compoundsfor JUB gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for JUB
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Transcriptsfor JUB gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for JUB gene (2 alternative transcripts): NM_032876.4 NM_198086.1
Additional cDNA sequence: AK025567.1 AK096128.1 AY169959.1 BC007580.1 BC016733.1 BC034968.2
10 DOTS entries : DT.100775739 DT.455766 DT.120777830 DT.92426492 DT.102836338 DT.100775734 DT.100737442 DT.40129291
DT.120777678 DT.100775735 24/146 AceView cDNA sequences (see all 146 ):
AY169959 CN482905 CB135297 BQ958701 BU163376 BC007580 BQ232031 BU149830 NM_198086 BQ439546 BM680549 D12422 BM718100 NM_032876 BM479543 CA442366 AI918246 BI260853 BU543883 CB105530 CB106040 AW169067 BX109281 CB143855
highest scoring ESTs for JUB :BM046574 BM800674 BG490419 CB150160 CK903938 AA152464 AI289311 BC034968 BG117516 BG753539 Unigene Cluster for JUB:
Jub, ajuba homolog (Xenopus laevis) Hs.655832 [show with all ESTs ] Unigene Representative Sequence: NM_032876 GeneLoc Exon Structure 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000361265 ENST00000262713 (uc001why.2 uc001whz.2 ) ENST00000397388
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Expression for JUB gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section JUB expression in normal and diseased human tissues 1 / 2 / 3
7 probe-sets matching JUB gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
45845_at2 , 3
U95-B
1
0.81
1.00
0.94
0.66
AA628404
0.40
0.67
0.55
1
54506_at2 , 3
U95-B
1
0.81
1.00
0.95
1.34
AI289311
0.60
0.75
0.68
1
225806_at2 , 3
U133-B
1
1.00
1.00
--
--
AI289311
0.60
0.75
0.68
1
225807_at2 , 3
U133-B
1
0.82
1.00
--
--
AK025567
0.40
0.67
0.55
1
1553764_a_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
225806_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
225807_at2
U133Plus2
1
0.82
1.00
--
--
--
--
--
--
--
About this table
JUB for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CTTTGGATAT SOURCE GeneReport for Unigene cluster: Hs.655832 SABiosciences Custom PCR Arrays for JUB
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Orthologsfor JUB gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for JUB gene from 5 species
About this table Species with no ortholog for JUB ENSEMBL Gene Tree for JUB (if available)
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Paralogsfor JUB gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for JUB gene TRIP6 2 FBLIM1 2 LPP 2 LOC100288695 2 LIMS3-LOC440895 2 WTIP 2 LIMS1 2 ZYX 2 LIMS2 2 LIMD1 2
JUB for paralogs About GeneDecksing
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Genomic Variantsfor JUB gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 14 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for JUB (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for JUB: --
QIAGEN SeqTarget long-range PCR primers for resequencing JUB
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Disorders & Mutationsfor JUB gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
JUB for disorders About GeneDecksing
OMIM: 609066 Export disorders and mutations for JUB gene to outside databases
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Medical Newsfor JUB gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor JUB gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/26 PubMed articles for JUB gene, integrated from 7 sources (see all 26 ): (articles sorted by number of sources associating them with JUB) LATS2-Ajuba complex regulates gamma-tubulin recruitment to centrosomes and spindle organization during mitosis. (PubMed id 16413547) 1 , 2 Abe Y.... Yamamoto T. (2006) The LIM protein Ajuba influences interleukin-1-induced NF-kappaB activation by affecting the assembly and activity of the protein kinase Czeta/p62/TRAF6 signaling complex. (PubMed id 15870274) 1 , 2 Feng Y. and Longmore G.D. (2005) The LIM protein Ajuba is recruited to cadherin-dependent cell junctions through an association with alpha-catenin. (PubMed id 12417594) 1 , 2 Marie H.... Braga V.M. (2003) Aurora-A and an interacting activator, the LIM protein Ajuba, are required for mitotic commitment in human cells. (PubMed id 13678582) 1 , 2 Hirota T.... Saya H. (2003) Ajuba, a novel LIM protein, interacts with Grb2, augments mitogen-activated protein kinase activity in fibroblasts, and promotes meiotic maturation of Xenopus oocytes in a Grb2- and Ras-dependent manner. (PubMed id 10330178) 1 , 3 Goyal R.K....Longmore G.D. (1999) Centrosome-related genes, genetic variation, and risk of breast cancer. (PubMed id 20508983) 1 Olson J.E....Couch F.J. (2010) LIM protein Ajuba functions as a nuclear receptor cor epressor and negatively regulates retinoic acid signaling. (PubMed id 20133701) 1 Hou Z....Rauscher F.J. (2010) Ajuba: a new microtubule-associated protein that interacts with BUBR1 and Aurora B at kinetochores in metaphase. (PubMed id 18710370) 1 Ferrand A....Birnbaum D. (2009) Large-scale proteomics analysis of the human kinome. (PubMed id 19369195) 2 Oppermann F.S.... Daub H. (2009) Ajuba negatively regulates the Wnt signaling pathway by promoting GSK-3beta-mediated phosphorylation of beta-catenin. (PubMed id 17621269) 1 Haraguchi K....Yamamoto T. (2008)
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External Searches for JUB gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing JUB gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing JUB gene
(According to HUGE )
About This Section --
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Specialized Databases showing JUB gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for JUB gene: Search GeneIP for patents involving JUB GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor JUB gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Antibodies & Assays for JUB   (Ajuba)
Search Tocris compounds for JUB
ELISAs and CLIAs for JUB
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