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KIR2DS1 Gene

protein-coding   GIFtS: 42

GC19P055281
killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 1
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Products    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases & Descriptions
killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail,
11 2
     KIR2DL1-KIR2DS12
CD158H1 2 3     CD158a2
MHC class I NK cell receptor Eb6 ActI2 3     p50.12
CD158 antigen-like family member H2 3     killer-cell immunoglobulin-like receptor2
EB6ActII1     killer cell immunoglobulin-like receptor 2DS12
EB6ActI1     CD158h antigen3

External Ids:    HGNC: 63331   Entrez Gene: 38062   Ensembl: ENSG000001254987   UniProtKB: Q149543   

Export aliases for KIR2DS1 gene to outside databases

Previous GC identifers: GC19U990053 GC19P9D0115 GC19P9F0116 GC00P9Q0116 GC19P9H0008 GC19P059932 GC19P9I0115 GC19P9I0024 GC19P9I0101


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for KIR2DS1:
Killer cell immunoglobulin-like receptors (KIRs) are transmembrane glycoproteins expressed by natural killer cells and
subsets of T cells. The KIR genes are polymorphic and highly homologous and they are found in a cluster on chromosome
19q13.4 within the 1 Mb leukocyte receptor complex (LRC). The gene content of the KIR gene cluster varies among
haplotypes, although several "framework" genes are found in all haplotypes (KIR3DL3, KIR3DP1, KIR3DL4,
KIR3DL2). The KIR proteins are classified by the number of extracellular immunoglobulin domains (2D or 3D) and by
whether they have a long (L) or short (S) cytoplasmic domain. KIR proteins with the long cytoplasmic domain transduce
inhibitory signals upon ligand binding via an immune tyrosine-based inhibitory motif (ITIM), while KIR proteins with
the short cytoplasmic domain lack the ITIM motif and instead associate with the TYRO protein tyrosine kinase binding
protein to transduce activating signals. The ligands for several KIR proteins are subsets of HLA class I molecules;
thus, KIR proteins are thought to play an important role in regulation of the immune response. (provided by RefSeq)

UniProtKB/Swiss-Prot: KI2S1_HUMAN, Q14954
Function: Receptor on natural killer (NK) cells for HLA-C alleles. Does not inhibit the activity of NK cells


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 60), Regulatory elements and Epigenetics data according to Qiagen and/or SABiosciences)
About This Section

Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for KIR2DS1
         Other transcription factors

   Search SABiosciences Chromatin IP Primers for KIR2DS1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays 


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.4   Ensembl cytogenetic band:  19q13.42   HGNC cytogenetic band: 19q13.4

KIR2DS1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
KIR2DS1 gene location

GeneLoc gene densities for chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19P055281:  view genomic region     (about GC identifiers)

Start:
55,281,263 bp from pter
End:
55,295,498 bp from pter
Size:
14,236 bases
Orientation:
plus strand

1 alternative location:
Chr19+,NT_113949 115,099-129,113     

(According to 1UniProtKB, neXtProt, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Millipore, Sigma-Aldrich, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, and/or ProSpec,
Biochemical Assays by Millipore, Sigma-Aldrich, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Dec 2010 and Entrez Gene, Antibodies by Millipore, Sigma-Aldrich, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, and/or Epitomics)
About This Section

UniProtKB/Swiss-Prot: KI2S1_HUMAN, Q14954 (See protein sequence)
Recommended Name: Killer cell immunoglobulin-like receptor 2DS1 precursor  
Size: 304 amino acids; 33646 Da
Subcellular location: Cell membrane; Single-pass type I membrane protein
Secondary accessions: O43471

Explore the universe of human proteins at neXtProt for KIR2DS1: NX_Q14954 

REFSEQ proteins: NP_055327.1  

ENSEMBL proteins: 
ENSP00000336769 ENSP00000291633 


Human Recombinant Proteins 
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3 Gene Ontology (GO) cellular component terms (GO ID links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005886 plasma membrane TAS--
GO:0005887 integral to plasma membrane ----
GO:0016021 integral to membrane NAS8627176
About this table

KIR2DS1 for ontologies           About GeneDecksing



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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

KIR2DS1 for domains           About GeneDecksing

3 InterPro domains/families:
 IPR013783 Ig-like_fold
 IPR003599 Ig_sub
 IPR013151 Immunoglobulin

Graphical View of Domain Structure for InterPro Entry Q14954

ProtoNet protein and cluster: Q14954

1 Blocks protein family: IPB003599 Immunoglobulin subtype

UniProtKB/Swiss-Prot: KI2S1_HUMAN, Q14954
Similarity: Belongs to the immunoglobulin superfamily
Similarity: Contains 2 Ig-like C2-type (immunoglobulin-like) domains


(According to UniProtKB, IUBMB,and/or Genatlas, Animal models from MGI Dec 24 2010,
shRNA from OriGene, Sigma-Aldrich, RNAi from Millipore, siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich, microRNA from Sigma-Aldrich, Qiagen, SABiosciences, Clones from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, Cell Lines from GenScript, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene.)
About This Section

UniProtKB/Swiss-Prot: KI2S1_HUMAN, Q14954
Function: Receptor on natural killer (NK) cells for HLA-C alleles. Does not inhibit the activity of NK cells

Inhib.
RNA:
    
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miRNA:Browse microRNA Mimics at Sigma-Aldrich
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Gene
Editing:
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Clones:Browse Clones for the Expression of Recombinant Proteins Available from Millipore
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OriGene GFP tagged cDNA clones in CMV expression vector: KIR2DS1
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Cell
Lines:
  
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Genatlas biochemistry entry for KIR2DS1:
natural killer cell immunoglobulin-like activating receptor for HLA-C antigens,2DS1

3 Gene Ontology (GO) molecular function terms (GO ID links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0004872 receptor activity ----
GO:0004888 transmembrane receptor activity NAS8627176
GO:0005515 protein binding ----
About this table

KIR2DS1 for ontologies           About GeneDecksing


(Pathways according to Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB, Sets of similar genes according to GeneDecks, PCR Arrays from SABiosciences, Proteins Network according to SABiosciences, Sigma-Aldrich, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene).
About This Section


KIR2DS1 for pathways           About GeneDecksing

1 Millipore Pathway for KIR2DS1
    Immune response Role of DAP12 receptors in NK cells

1 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathway for  KIR2DS1
    Natural Killer Cell Signaling

2 Kegg Pathways  (Kegg details for KIR2DS1):
    hsa04612 Antigen processing and presentation
hsa04650 Natural killer cell mediated cytotoxicity

    SABiosciences Custom Pathway-Focused PCR Arrays for KIR2DS1 

    Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for KIR2DS1
    Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for KIR2DS1

3 Gene Ontology (GO) biological process terms (GO ID links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0002769 natural killer cell inhibitory signaling pathway ----
GO:0006955 immune response NAS8627176
GO:0050776 regulation of immune response TAS--
About this table

KIR2DS1 for ontologies           About GeneDecksing



(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section
Browse Small Molecules at Sigma-Aldrich
Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for KIR2DS1


(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Millipore,
siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene, microRNA from Sigma-Aldrich, Qiagen, SABiosciences,
Tagged/untagged cDNA clones from OriGene, Sigma-Aldrich, GenScript, Primers from OriGene and/or SABiosciences)
About This Section

Inhib.
RNA:
     
Browse for Gene Knock-down Tools from Millipore
Browse Nano Scale siRNA at Sigma-Aldrich
Sigma-Aldrich siRNA for KIR2DS1
Sigma-Aldrich shRNA for KIR2DS1
OriGene 29mer shRNA kits in GFP-retroviral vector: KIR2DS1
OriGene shRNA RFP: KIR2DS1
OriGene basic RS shRNA: KIR2DS1
OriGene siRNA: KIR2DS1
QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of KIR2DS1 
miRNA: Browse microRNA Mimics at Sigma-Aldrich
Browse microRNA target validation systems at Sigma-Aldrich 
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of KIR2DS1 
Search SABiosciences for Assays for microRNAs that regulate KIR2DS1
Clones: Browse FLAG tag genes at Sigma-Aldrich
OriGene GFP tagged cDNA clones in CMV expression vector: KIR2DS1
OriGene Myc/DDK tagged cDNA clones in CMV expression vector: KIR2DS1
OriGene untagged cDNA clones in CMV expression vector: KIR2DS1
Browse 3'-UTR reporter clones for miRNA target validation 
Browse OriGene MicroRNA Expression Plasmids 
GenScript cDNA clone with any tag delivered in your preferred vector: KIR2DS1 
Primers: OriGene genome-wide validated SYBR primer pairs: KIR2DS1
Browse OriGene validated miRNA SYBR primer pairs 
Search SABiosciences RT2 qPCR Primer Assays for KIR2DS1

REFSEQ mRNAs for KIR2DS1 gene: 

NM_014512.1  

24/93 AceView cDNA sequences (see all 93):

AY366242 AF208054 AY223515 AY052497 AY052498 AF285434 AF034773 AF002981 
X99480 NM_014219 BV203728 BV199098 BM917014 BV204361 BM918119 AF002979 
BC041611 BX952500 X99481 L76668 AF002256 BV199144 U24079 Y13054 

highest scoring ESTs for KIR2DS1:

AJ620616 


GeneLoc Exon Structure

2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
ENST00000336077(uc010erz.1 uc002qhb.1) ENST00000291633

(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 228 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Primers from OriGene and/or SABiosciences )
About This Section

KIR2DS1 expression in normal and diseased human tissues

1  / 2  / 3

2 probe-sets matching KIR2DS1 gene

Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
208198_x_at2, 3 U133-A 16 0.91 0.29 -- -- NM_014512 0.20 0.03 0.14 2
208198_x_at2 U133Plus2 16 0.91 0.29 -- -- -- -- -- -- --
About this table
Data from Genenote  (Publications) and GNF BioGPS
    About these images
KIR2DS1 gene expression
KIR2DS1 gene electronic northern expression
KIR2DS1 gene sage expression
About these images

CGAP SAGE TAG: --
Primers: OriGene genome-wide validated SYBR primer pairs: KIR2DS1
Browse OriGene validated miRNA SYBR primer pairs 
Search SABiosciences RT2 qPCR Primer Assays for KIR2DS1
    SABiosciences Custom PCR Arrays for KIR2DS1 


(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Dec 24 2010, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section
ENSEMBL Gene Tree for KIR2DS1 (if available)

(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
Paralogs for KIR2DS1 gene
KIR2DL1  KIR2DS2  KIR2DS5  KIR2DS41 2  KIR2DL3  KIR2DL42  KIR2DS32  KIR3DX12  
IGSF12  KIR3DL32  KIR3DL12  OSCAR2  A1BG2  KIR2DL22  KIR3DL22  ENSG000002177922  
TARM12  

KIR2DS1 for paralogs           About GeneDecksing



(SNPs according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
Search QIAGEN SeqTarget long-range PCR primers for resequencing for KIR2DS1 

(in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, LSDB, HGMD, GAD, HuGE Navigator, and/or TGDB.)
About This Section

KIR2DS1 for disorders           About GeneDecksing

OMIM: 604952

1 Novoseek disease relationship for KIR2DS1 gene

Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
psoriasis 33.9 5 16829306 (3), 15310528 (2)
About this table

Locus Specific Mutation Databases (LSDB): KIR2DS1
Genetic Association Database (GAD): KIR2DS1
Human Genome Epidemiology (HuGE) Navigator: KIR2DS1 (81 documents)

Export disorders and mutations for KIR2DS1 gene to outside databases

(Possibly Related Articles in Doctor's Guide)
About This Section
  --

(in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6UniProtKB/TrEMBL, and/or 7Novoseek)
About This Section

10/106 PubMed articles for KIR2DS1 gene, integrated from 7 sources (see all 106):
(articles sorted by number of sources associating them with KIR2DS1)
  1. The human leukocyte antigen (HLA)-C-specific 'activatory' or 'inhibitory' natural killer cell receptors display highly homologous extracellular domains but differ in their transmembrane and intracytoplasmic portions. (PubMed id 8627176)1, 2, 3 Biassoni R.... Moretta L. (1996)
  2. Gene for the activating natural killer cell receptor, KIR2DS1, is associated with susceptibility to psoriasis vulgaris. (PubMed id 15310528)1, 4, 7 L/uszczek W....Kusnierczyk P. (2004)
  3. Distribution of killer cell immunoglobulin-like receptor genes in the Chinese Han population. (PubMed id 15896204)1, 4 Jiang K....Yan L.X. (2005)
  4. Distinct HLA-C/KIR genotype profile associates with guttate psoriasis. (PubMed id 16185272)1, 4 Holm S.J....Sanchez F.O. (2005)
  5. Activating killer cell immunoglobulin-like receptor gene KIR2DS1 is associated with psoriatic arthritis. (PubMed id 16112031)1, 4 Williams F....Middleton D. (2005)
  6. The DNA sequence and biology of human chromosome 19. (PubMed id 15057824)1, 2 Grimwood J.... Lucas S.M. (2004)
  7. Genetic polymorphisms of killer cell immunoglobulin-like receptors are associated with susceptibility to psoriasis vulgaris. (PubMed id 15140215)1, 4 Suzuki Y....Muto M. (2004)
  8. Human diversity in killer cell inhibitory receptor genes. (PubMed id 9430221)1, 2 Uhrberg M.... Parham P. (1997)
  9. A role for KIR gene variants other than KIR2DS1 in conferring susceptibility to psoriasis. (PubMed id 16829306)1, 7 Pl/oski R....Malejczyk J. (2006)
  10. Activating killer cell immunoglobulin-like receptors 3DS1 and 2DS1 protect against developing the severe form of recurrent respirato ry papillomatosis. (PubMed id 19861144)1, 7 Bonagura V.R....Rajalingam R. (2010)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section
 ANDOR
Aliases
Disorders
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section
Entrez Gene: 3806 HGNC: 6333 AceView: KIR2DL4 Ensembl:ENSG00000125498 euGenes: HUgn3806
ECgene: KIR2DS1 Kegg: 3806 H-InvDB: KIR2DS1

(According to HUGE)
About This Section
  --

(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
  --

(Patent information from GeneIP,
Licensable technologies from WIS Yeda, Salk, Tufts,
IP news from XenneX, Inc.)
About This Section
Patent Information for KIR2DS1 gene:
Search GeneIP for patents involving KIR2DS1

GeneCards and IP:
Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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