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Aliases & Descriptionsfor KLHL12 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions kelch-like 12 (Drosophila)1 2 kelch-like protein 122 C3IP11 2 3 DKIR2 CUL3-interacting protein 12 3 kelch-like protein C3IP12 FLJ271522
Export aliases for KLHL12 gene to outside databases Previous GC identifers: GC01M200149 GC01M199591 GC01M201126 GC01M202860
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Summariesfor KLHL12 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: KLH12_HUMAN, Q53G59 Function : Serves as a substrate-specific adapter for the CUL3-based ubiquitin-protein E3 ligase complex. Negativelyregulates the Wnt signaling pathway via the targeted ubiquitination and subsequent proteolysis of DVL3 Gene Wiki entry for KLHL12
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Genomic Viewsfor KLHL12 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the KLHL12 gene promoter: MEF-2A RP58 FOXC1 GATA-1 ITF-2 Tal-1beta E47 Tal-1 deltaCREB CREB Other transcription factors Search SABiosciences Chromatin IP Primers for KLHL12 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for KLHL12
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1q32.1 Ensembl cytogenetic band: 1q32.1 HGNC cytogenetic band: 1q32.1 KLHL12 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M174025: view genomic region
(about GC identifiers )
Start:
174,025,817 bp from pter
End:
174,061,990 bp from pter
Size:
36,174 bases
Orientation:
minus strand
1 alternative location : Chr 1- 202,860,228-202,897,764
RefSeq DNA sequence: NC_000001.10 NT_004487.19
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Proteinsfor KLHL12 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: KLH12_HUMAN, Q53G59 (See
protein sequence )Recommended Name: Kelch-like protein 12 Size : 568 amino acids; 63277 Da
Subunit : Component of an ubiquitin-protein E3 ligase complex which includes at least CUL3 and KLHL12. This complexinteracts with DVL3 upon activation of the Wnt signaling pathway by WNT3A
PDB structures from and Proteopedia : 2VPJ (3D)
 
Secondary accessions : Q9HBX5Explore the universe of human proteins at neXtProt for KLHL12: NX_Q53G59 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_067646.1 ENSEMBL proteins: ENSP00000356230 ENSP00000356228 ENSP00000356227 ENSP00000356229 ENSP00000416886 Human Recombinant Proteins Antibodies for KLHL12: Assays for KLHL12:
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Protein
Domains/ Familiesfor KLHL12 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
KLHL12 for domains About GeneDecksing 5/8 InterPro domains/families (see all 8 ):
Graphical View of Domain Structure for InterPro Entry Q53G59 ProtoNet protein and cluster: Q53G59
3 Blocks protein families : IPB000210 BTB/POZ domain IPB006651 Kelch repeat signature IPB011705 BTB/Kelch-associated UniProtKB/Swiss-Prot: KLH12_HUMAN, Q53G59 Domain : The BTB domain is required for interaction with CUL3Similarity : Contains 1 BTB (POZ) domainSimilarity : Contains 6 Kelch repeats
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Gene Functionfor KLHL12 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: KLH12_HUMAN, Q53G59 Function : Serves as a substrate-specific adapter for the CUL3-based ubiquitin-protein E3 ligase complex. Negativelyregulates the Wnt signaling pathway via the targeted ubiquitination and subsequent proteolysis of DVL3
1 Gene Ontology (GO) molecular function term (GO ID links to tree view) :
About this table
KLHL12 for ontologies About GeneDecksing
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Pathways & Interactionsfor KLHL12 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section SABiosciences Custom Pathway-Focused PCR Arrays for KLHL12 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KLHL12 5/17 Interacting proteins for KLHL12 (Q53G59 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 17 )About this table 1 Gene Ontology (GO) biological process term (GO ID links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0016055 Wnt receptor signaling pathway
IEA --
About this table
KLHL12 for ontologies About GeneDecksing
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Drugs & Compoundsfor KLHL12 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for KLHL12
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Transcriptsfor KLHL12 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for KLHL12 gene: NM_021633.2
Additional cDNA sequence: AF190900.1 AF306687.1 AF306689.1 AK024412.1 AK027656.1 AK130662.1 AK223072.1 AK301791.1 BC003183.1 BC004175.2
9 DOTS entries : DT.116274 DT.100784180 DT.100025398 DT.100784179 DT.97846638 DT.100784178 DT.85105660 DT.120668416
DT.95206014 24/246 AceView cDNA sequences (see all 246 ):
BM764489 BQ422794 AI125849 AA227427 AF306689 AI333665 AI468687 AI283713 AA514940 AI123409 BM826174 AI436238 BM742703 AA442554 CK819843 AI276997 N24733 BM670604 BQ422098 AW293125 CK819844 BM713730 BM998417 AW467990
highest scoring ESTs for KLHL12 :AA314329 AA323430 AW732578 BE615762 BE784433 BF204009 BG773551 BI463251 BI464637 BM019569 Unigene Cluster for KLHL12:
Kelch-like 12 (Drosophila) Hs.706793 [show with all ESTs ] Unigene Representative Sequence: NM_021633 GeneLoc Exon Structure 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000367261 (uc001gyn.1 uc001gyo.1 uc009xah.1 ) ENST00000367259 (uc001gym.1 )ENST00000367258 ENST00000367260 ENST00000435533 (uc010pqc.1 )
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Expression for KLHL12 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section KLHL12 expression in normal and diseased human tissues 1 / 2 / 3
5 probe-sets matching KLHL12 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
65869_at2 , 3
U95-C
1
0.94
1.00
1.00
1.00
U69560
0.80
0.88
0.84
1
225068_at2 , 3
U133-B
1
0.91
1.00
--
--
AK024412
0.60
1.00
0.82
1
219931_s_at2 , 3
U133-A
2
0.91
0.77
--
--
NM_021633
0.60
1.00
0.82
1
225068_at2
U133Plus2
1
0.91
1.00
--
--
--
--
--
--
--
219931_s_at2
U133Plus2
2
0.91
0.77
--
--
--
--
--
--
--
About this table
KLHL12 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GAGTGAAATT SOURCE GeneReport for Unigene cluster: Hs.706793 UniProtKB/Swiss-Prot: KLH12_HUMAN, Q53G59 Tissue specificity : Highly expressed in testis and at lower levels in the submandibular salivary gland
SABiosciences Custom PCR Arrays for KLHL12
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Orthologsfor KLHL12 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for KLHL12 gene from 5/9 species (see all 9 )
About this table Species with no ortholog for KLHL12 ENSEMBL Gene Tree for KLHL12 (if available)
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Paralogsfor KLHL12 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for KLHL12 gene KLHL7 2 KEAP1 2 IPP 2 KLHL10 2 IVNS1ABP 2 KLHL8 2
KLHL12 for paralogs About GeneDecksing
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Genomic Variantsfor KLHL12 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 1 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for KLHL12 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for KLHL12: --
QIAGEN SeqTarget long-range PCR primers for resequencing KLHL12
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Disorders & Mutationsfor KLHL12 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
KLHL12 for disorders About GeneDecksing Human Genome Epidemiology (HuGE) Navigator: KLHL12 (1 document)Export disorders and mutations for KLHL12 gene to outside databases
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Medical Newsfor KLHL12 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor KLHL12 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/14 PubMed articles for KLHL12 gene, integrated from 7 sources (see all 14 ): (articles sorted by number of sources associating them with KLHL12) The KLHL12-cullin-3 ubiquitin ligase negatively regulates the Wnt- beta-catenin pathway by targeting Dishevelled for degradation. (PubMed id 16547521) 1 , 2 Angers S.... Moon R.T. (2006) Identification of specific autoantigens in Sjoegren's syndrome by SEREX. (PubMed id 16108817) 1 , 2 Uchida K.... Kozaki K. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 , 3 Strausberg R.L....Marra M.A. (2002) Follow-up of a major linkage peak on chromosome 1 rev eals suggestive QTLs associated with essential hypertension: GenNet study. (PubMed id 19536175) 1 Ehret G.B....Chakravarti A. (2009) Automated phosphoproteome analysis for cultured cancer cells by two- dimensional nanoLC-MS using a calcined titania/C18 biphasic column. (PubMed id 18187866) 2 Imami K.... Ishihama Y. (2008) BTB Protein KLHL12 targets the dopamine D4 receptor for ubiquitination by a Cul3-based E3 ligase. (PubMed id 18303015) 1 Rondou P....Van Craenenbroeck K. (2008) A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PubMed id 16713569) 1 Lim J.... Zoghbi H.Y. (2006) Towards a proteome-scale map of the human protein-protein interaction network. (PubMed id 16189514) 1 Rual J.F....Vidal M. (2005)
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External Searches for KLHL12 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing KLHL12 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing KLHL12 gene
(According to HUGE )
About This Section --
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Specialized Databases showing KLHL12 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for KLHL12 gene: Search GeneIP for patents involving KLHL12 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor KLHL12 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for KLHL12
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