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Aliases & Descriptionsfor KLK5 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions kallikrein-related peptidase 51 2 Kallikrein-like protein 22 3 SCTE1 2 3 5 KLKL22 5 KLK-L21 2 3 kallikrein-52 kallikrein 51 2 EC 3.4.21.-3 Stratum corneum tryptic enzyme2 3
Export aliases for KLK5 gene to outside databases Previous GC identifers: GC19M052075 GC19M051807 GC19M056122 GC19M056138 GC19M051446
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Summariesfor KLK5 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for KLK5 : Kallikreins are a subgroup of serine proteases having diverse physiological functions. Growing evidence suggests that many kallikreins are implicated in carcinogenesis and some have potential as novel cancer and other disease biomarkers. This gene is one of the fifteen kallikrein subfamily members located in a cluster on chromosome 19. Its expression is up-regulated by estrogens and progestins. The encoded protein is secreted and may be involved in desquamation in the epidermis. Alternative splicing results in multiple transcript variants encoding the same protein. (provided by RefSeq) UniProtKB/Swiss-Prot: KLK5_HUMAN, Q9Y337 Function : May be involved in desquamationGene Wiki entry for KLK5
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Genomic Viewsfor KLK5 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the KLK5 gene promoter: ATF COUP-TF1 HNF-4alpha2 GCNF-2 GCNF-1 PPAR-gamma1 PPAR-gamma2 GATA-1 ITF-2 Tal-1beta Other transcription factors Search SABiosciences Chromatin IP Primers for KLK5 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 19q13.33 Ensembl cytogenetic band: 19q13.41 HGNC cytogenetic band: 19q13.33 KLK5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19M047780: view genomic region
(about GC identifiers )
Start:
47,779,285 bp from pter
End:
47,788,696 bp from pter
Size:
9,412 bases
Orientation:
minus strand
1 alternative location : Chr 19- 51,446,561-51,456,344
RefSeq DNA sequence: NC_000019.9 NT_011109.16
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Proteinsfor KLK5 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: KLK5_HUMAN, Q9Y337 (See
protein sequence )Recommended Name: Kallikrein-5 precursor Size : 293 amino acids; 32019 Da
Subunit : Interacts with SPINK9
Subcellular location : Secreted
PDB structure from and Proteopedia : 2PSX (3D)
 2PSY (3D)
 
Secondary accessions : Q9HBG8Explore the universe of human proteins at neXtProt for KLK5: NX_Q9Y337
REFSEQ proteins (3 alternative transcripts):
NP_001070959.1 NP_001070960.1 NP_036559.1 ENSEMBL proteins: ENSP00000337733 ENSP00000375685 ENSP00000403445 Human Recombinant Proteins 2 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
About this table
KLK5 for ontologies About GeneDecksing Antibodies for KLK5: Assays for KLK5:
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Protein
Domains/ Familiesfor KLK5 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
KLK5 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q9Y337 ProtoNet protein and cluster: Q9Y337
2 Blocks protein families : IPB001254 Serine protease IPB001314 Chymotrypsin serine protease family (S1) signature UniProtKB/Swiss-Prot: KLK5_HUMAN, Q9Y337 Similarity : Belongs to the peptidase S1 family. Kallikrein subfamilySimilarity : Contains 1 peptidase S1 domain
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Gene Functionfor KLK5 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: KLK5_HUMAN, Q9Y337 Function : May be involved in desquamationEnzyme regulation : Inhibited by Zn2+Enzyme Number (IUBMB): EC 3.4.21.-
5 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
KLK5 for ontologies About GeneDecksing
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Pathways & Interactionsfor KLK5 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
KLK5 for pathways About GeneDecksing 1 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathway for KLK5 SABiosciences Pathway-Focused PCR Array including KLK5 : PAHS-005A Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for KLK5 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for KLK5 3 Gene Ontology (GO) biological process terms (GO ID links to tree view) :
About this table
KLK5 for ontologies About GeneDecksing
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Drugs & Compoundsfor KLK5 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section
KLK5 for compounds About GeneDecksing
Enzo Life Sciences drugs & compounds for KLK5
Browse Tocris compounds for KLK5 3 Novoseek chemical compound relationships for KLK5 gene
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Transcriptsfor KLK5 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for KLK5 gene (3 alternative transcripts): NM_001077491.1 NM_001077492.1 NM_012427.4
Additional cDNA sequence: AF168768.2 AF435980.1 AF435981.1 AK223421.1 AY279380.1 AY279381.1 AY359010.1 BC008036.2 BT006867.1
4 DOTS entries : DT.309895 DT.100765127 DT.95154818 DT.91744955
24/58 AceView cDNA sequences (see all 58 ):
AY359010 AY461805 AA595959 BM840511 AY279381 BM842755 W73168 BM763825 W68361 BM840509 BF514439 W73140 AY279380 BF513278 BM763568 BE899189 BG680075 BE898385 AA862032 BM838406 BM845065 BG680921 BV179852 BE898407
highest scoring ESTs for KLK5 :AF168768 AF435980 AF435981 AI002163 AY279380 AY279381 AY359010 BC008036 BE075958 BE272355 Unigene Cluster for KLK5:
Kallikrein-related peptidase 5 Hs.50915 [show with all ESTs ] Unigene Representative Sequence: AY359010 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for KLK5 ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 SP1 :     -               SP2 :                   SP3 :     -   -             SP4 :       -             SP5 :                  
About this scheme ECgene alternative splicing isoforms for KLK5 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000336334 (uc002pug.2 ) ENST00000391809 (uc002pue.2 ) ENST00000448298 (uc002puf.2 )
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Expression for KLK5 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section KLK5 expression in normal and diseased human tissues 1 / 2 / 3
3 probe-sets matching KLK5 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
46897_at2 , 3
U95-B
1
1.00
1.00
1.00
1.00
AI002163
0.80
1.00
0.91
1
222242_s_at2
U133-A
1
1.00
1.00
--
--
--
--
--
--
--
222242_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
About this table
KLK5 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TCTCCTGGAC SOURCE GeneReport for Unigene cluster: Hs.50915 UniProtKB/Swiss-Prot: KLK5_HUMAN, Q9Y337 Tissue specificity : Expressed in skin, breast, brain and testis. Expressed at the stratum granulosum of palmar skin
SABiosciences Expression via Pathway-Focused PCR Array including KLK5 : PAHS-005A
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Orthologsfor KLK5 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for KLK5 gene from 5 species
About this table Species with no ortholog for KLK5 ENSEMBL Gene Tree for KLK5 (if available)
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Paralogsfor KLK5 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for KLK5 gene KLK13 2 KLK6 2 KLK12 2 KLK2 2 KLK10 2 KLK1 2 KLK15 2 KLK4 2 KLK11 2 KLK7 2 KLK8 2 KLK3 2 KLK9 2
KLK5 for paralogs About GeneDecksing
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Genomic Variantsfor KLK5 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 19 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for KLK5 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for KLK5: --
QIAGEN SeqTarget long-range PCR primers for resequencing KLK5
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Disorders & Mutationsfor KLK5 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
KLK5 for disorders About GeneDecksing
OMIM: 605643 6 Novoseek disease relationships for KLK5 gene
About this table Human Genome Epidemiology (HuGE) Navigator: KLK5 (1 document)Export disorders and mutations for KLK5 gene to outside databases
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Medical Newsfor KLK5 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor KLK5 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/58 PubMed articles for KLK5 gene, integrated from 7 sources (see all 58 ): (articles sorted by number of sources associating them with KLK5) Purification, molecular cloning, and expression of a human stratum corneum trypsin-like serine protease with possible function in desquamation. (PubMed id 10514489) 1 , 2 , 3, 7 Brattsand M. and Egelrud T. (1999) The new kallikrein-like gene, KLK-L2. Molecular chara cterization, mapping, tissue expression, and hormonal regulation. (PubMed id 10608802) 1 , 3, 7 Yousef G.M. and Diamandis E.P. (1999) SPINK9: a selective, skin-specific Kazal-type serine protease inhibitor. (PubMed id 19194479) 1 , 2 , 7 Brattsand M.... Egelrud T. (2009) Kallikrein-mediated proteolysis regulates the antimicrobial effects of cathelicidins in skin. (PubMed id 17012259) 1 , 3, 7 Yamasaki K....Gallo R.L. (2006) Structural basis of the zinc inhibition of human tissue kallikrein 5. (PubMed id 17881000) 1 , 2 Debela M.... Bode W. (2007) Proceedings of the 1st International Symposium on Kallikreins, Lausanne, Switzerland, September 1-3 , 2005. (PubMed id 16800723) 1 , 3 (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309) 1 , 2 Clark H.F.... Gray A.M. (2003) Sequencing and expression analysis of the serine protease gene cluster located in chromosome 19q13 region. (PubMed id 11054574) 1 , 2 Gan L.... Wang K. (2000) Identification of novel human kallikrein-like genes on chromosome 19q13.3-q13.4. (PubMed id 10652563) 1 , 2 Yousef G.M.... Diamandis E.P. (1999)
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External Searches for KLK5 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing KLK5 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing KLK5 gene
(According to HUGE )
About This Section --
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Specialized Databases showing KLK5 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for KLK5 gene: Search GeneIP for patents involving KLK5 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor KLK5 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for KLK5
ELISAs and CLIAs for KLK5
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