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Aliases & Descriptionsfor MAP4K1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions mitogen-activated protein kinase kinase kinase kinase 11 2 MEKKK 12 3 HPK11 2 3 5 hematopoietic progenitor kinase 12 MAPK/ERK kinase kinase kinase 12 3 Hematopoietic progenitor kinase3 MEK kinase kinase 12 3 EC 2.7.11.13
Export aliases for MAP4K1 gene to outside databases Previous GC identifers: GC19M039692 GC19M039469 GC19M043754 GC19M043770 GC19M039078
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Summariesfor MAP4K1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: M4K1_HUMAN, Q92918 Function : May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminalpathway. May play a role in hematopoietic lineage decisions and growth regulation Gene Wiki entry for MAP4K1
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Genomic Viewsfor MAP4K1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MAP4K1 gene promoter: AP-1 NF-kappaB1 c-Fos c-Jun CUTL1 NF-kappaB ZID POU2F1 GATA-1 NRSF form 1 Other transcription factors Search SABiosciences Chromatin IP Primers for MAP4K1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for MAP4K1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 19q13.1-q13.4 Ensembl cytogenetic band: 19q13.2 HGNC cytogenetic band: 19q13.1-q13.4 MAP4K1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19M035526: view genomic region
(about GC identifiers )
Start:
35,526,409 bp from pter
End:
35,555,215 bp from pter
Size:
28,807 bases
Orientation:
minus strand
1 alternative location : Chr 19- 39,078,281-39,108,643
RefSeq DNA sequence: NC_000019.9 NT_011109.16
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Proteinsfor MAP4K1 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: M4K1_HUMAN, Q92918 (See
protein sequence )Recommended Name: Mitogen-activated protein kinase kinase kinase kinase 1 Size : 833 amino acids; 91296 Da
Cofactor : Magnesium
Subunit : Interacts with MAP3K1Explore the universe of human proteins at neXtProt for MAP4K1: NX_Q92918 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001036065.1 NP_009112.1 ENSEMBL proteins: ENSP00000380066 ENSP00000221409 ENSP00000396383 Human Recombinant Proteins Antibodies for MAP4K1: Assays for MAP4K1:
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Protein
Domains/ Familiesfor MAP4K1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MAP4K1 for domains About GeneDecksing 5/7 InterPro domains/families (see all 7 ):
Graphical View of Domain Structure for InterPro Entry Q92918 ProtoNet protein and cluster: Q92918
1 Blocks protein family : IPB001180 Citron-like UniProtKB/Swiss-Prot: M4K1_HUMAN, Q92918 Similarity : Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamilySimilarity : Contains 1 CNH domainSimilarity : Contains 1 protein kinase domain
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Gene Functionfor MAP4K1 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: M4K1_HUMAN, Q92918 Function : May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminalpathway. May play a role in hematopoietic lineage decisions and growth regulation Catalytic activity : ATP + a protein = ADP + a phosphoproteinEnzyme Number (IUBMB): EC 2.7.11.1
Genatlas biochemistry entry for MAP4K1 :mitogen-activated kinase kinase kinase kinase 1,nuclear,predominantly expressed in hematopoietic cells,binding MAP3K1 (MEKK1) activating the JNK/SAPK kinase pathway 5/8 Gene Ontology (GO) molecular function terms (GO ID links to tree view) (see all 8 ):
About this table
MAP4K1 for ontologies About GeneDecksing Animal Models: 2 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Map4k1) :
MAP4K1 for phenotypes About GeneDecksing
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Pathways & Interactionsfor MAP4K1 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
MAP4K1 for pathways About GeneDecksing 1 Millipore Pathway for MAP4K1 5 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for MAP4K1 1 Kegg Pathway (Kegg details for MAP4K1) : SABiosciences Pathway-Focused PCR Arrays including MAP4K1 : PAHS-054A PAHS-061A Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for MAP4K1 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for MAP4K1 5/32 Interacting proteins for MAP4K1 (ENSP00000221409 3 Q92918 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 32 )Interactant Interaction Details GeneCard External ID(s) GRB2 P62993 1 , 2 STRING: ENSP00000339007 EBI-881,EBI-401755 MINT-7212988 MINT-7213120 MINT-7212968 MINT-7213066 MINT-7213002 MINT-7213078 MINT-7253194 NCK1 P16333 1 , 2 STRING: ENSP00000288986 EBI-881,EBI-389883 MINT-7213100 MINT-7213019 MINT-7247854 MINT-7249558 ABL1 P00519 1 , 2 STRING: ENSP00000361423 EBI-881,EBI-375543 MINT-7243318 MINT-7213035 MINT-7244806 CRK P46108 1 , 2 STRING: ENSP00000300574 EBI-881,EBI-886 MINT-7254804 MINT-7253998 FYN P06241 1 , 2 EBI-881,EBI-515315 MINT-7246558 MINT-7245946
About this table 5/6 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 6 ):
About this table
MAP4K1 for ontologies About GeneDecksing
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Drugs & Compoundsfor MAP4K1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section
MAP4K1 for compounds About GeneDecksing Browse Tocris compounds for MAP4K1 3 Novoseek chemical compound relationships for MAP4K1 gene
About this table
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Transcriptsfor MAP4K1 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for MAP4K1 gene (2 alternative transcripts): NM_001042600.1 NM_007181.4
Additional cDNA sequence: AK303267.1 CR590852.1 CR597185.1 CR599547.1 U66464.1
10 DOTS entries : DT.100748776 DT.99993411 DT.97785383 DT.100720540 DT.97843110 DT.100748775 DT.40117714 DT.97825790
DT.121471144 DT.97792486 24/115 AceView cDNA sequences (see all 115 ):
BQ073002 CR590852 CR599547 AW575048 T50313 BQ437081 BM665397 BG389576 CR597185 AA749288 BQ430312 AL560823 BM479454 AL561215 AW408358 BQ064376 BM693263 BX345201 CD623848 BG397984 BQ639344 BG397271 BQ441919 AL582504
highest scoring ESTs for MAP4K1 :U66464 AA213920 BI518900 BI772412 AA251722 AA278218 AL560823 AL561618 AW403057 AW403902 Unigene Cluster for MAP4K1:
Mitogen-activated protein kinase kinase kinase kinase 1 Hs.95424 [show with all ESTs ] Unigene Representative Sequence: NM_007181 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for MAP4K1 (see all 6 ) ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 SP1 :         -   -       -                           SP2 :                 -                           SP3 :                                           SP4 :                                           SP5 :                                          
About this scheme ECgene alternative splicing isoforms for MAP4K1 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000396857 (uc002oiw.1 uc002oix.1 uc002oiy.1 ) ENST00000221409 ENST00000423454 (uc010xug.1 )
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Expression for MAP4K1 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section MAP4K1 expression in normal and diseased human tissues 1 / 2 / 3
7 probe-sets matching MAP4K1 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
138_at2 , 3
U95-A
1
0.81
1.00
1.00
1.00
U66464
1.00
1.00
1.00
1
214339_s_at2 , 3
U133-A
1
0.73
1.00
--
--
AA744529
0.40
1.00
0.76
1
214219_x_at2 , 3
U133-A
1
0.64
1.00
--
--
BE646618
0.20
1.00
0.72
1
206296_x_at2 , 3
U133-A
1
0.64
1.00
--
--
NM_007181
0.60
1.00
0.82
1
214339_s_at2
U133Plus2
1
0.73
1.00
--
--
--
--
--
--
--
214219_x_at2
U133Plus2
1
0.64
1.00
--
--
--
--
--
--
--
206296_x_at2
U133Plus2
1
0.64
1.00
--
--
--
--
--
--
--
About this table
MAP4K1 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.95424 Expression variation in blood from EXPOLDB for MAP4K1
UniProtKB/Swiss-Prot: M4K1_HUMAN, Q92918 Tissue specificity : Expressed primarily in hematopoietic organs, including bone marrow, spleen and thymus. Alsoexpressed at very low levels in lung, kidney, mammary glands and small intestine
SABiosciences Expression via Pathway-Focused PCR Arrays including MAP4K1 : PAHS-054A PAHS-061A
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Orthologsfor MAP4K1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for MAP4K1 gene from 5 species
About this table Species with no ortholog for MAP4K1 ENSEMBL Gene Tree for MAP4K1 (if available)
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Paralogsfor MAP4K1 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for MAP4K1 gene MAP4K5 2 MAP4K3 2 STK10 2 MAP4K2 2 SLK 2
MAP4K1 for paralogs About GeneDecksing
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Genomic Variantsfor MAP4K1 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 19 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for MAP4K1 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MAP4K1: --
QIAGEN SeqTarget long-range PCR primers for resequencing MAP4K1
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Disorders & Mutationsfor MAP4K1 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MAP4K1 for disorders About GeneDecksing
OMIM: 601983 1 Novoseek disease relationship for MAP4K1 gene
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
tumors
0
2
19141650 (2)
About this table Export disorders and mutations for MAP4K1 gene to outside databases
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Medical Newsfor MAP4K1 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor MAP4K1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/52 PubMed articles for MAP4K1 gene, integrated from 7 sources (see all 52 ): (articles sorted by number of sources associating them with MAP4K1) Human HPK1, a novel human hematopoietic progenitor kinase that activates the JNK/SAPK kinase cascade. (PubMed id 8824585) 1 , 2 , 3, 7 Hu M.C.-T.... Tan T.-H. (1996) Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry. (PubMed id 17192257) 1 , 2 Wissing J.... Daub H. (2007) Large-scale characterization of HeLa cell nuclear phosphoproteins. (PubMed id 15302935) 1 , 2 Beausoleil S.A....Gygi S.P. (2004) Interaction of hematopoietic progenitor kinase 1 with adapter proteins Crk and CrkL leads to synergistic activation of c-Jun N-terminal kinase. (PubMed id 9891069) 1 , 7 Ling P....Tan T.H. (1999) Protein phosphatase 4 is a positive regulator of hematopoietic progenitor kinase 1. (PubMed id 15364934) 1 , 7 Zhou G....Tan T.H. (2004) Involvement of hematopoietic progenitor kinase 1 in T cell receptor signaling. (PubMed id 11279207) 1 , 7 Ling P....Tan T.H. (2001) Proteasome-mediated degradation and functions of hematopoietic progenitor kinase 1 in pancreatic cancer. (PubMed id 19141650) 1 , 7 Wang H....Wang H. (2009) Caspase-mediated cleavage and functional changes of hematopoietic progenitor kinase 1 (HPK1). (PubMed id 10602493) 1 , 7 Chen Y.R....Tan T.H. (1999) Activation of hematopoietic progenitor kinase 1 involves relocation, autophosphorylation, and transphosphorylation by protein kinase D1. (PubMed id 15743830) 1 , 7 Arnold R....Kiefer F. (2005) Leukocyte-specific adaptor protein Grap2 interacts with hematopoietic progenitor kinase 1 (HPK1) to activate JNK signaling pathway in T lymphocytes. (PubMed id 11313918) 1 , 7 Ma W....Liu M. (2001)
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External Searches for MAP4K1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MAP4K1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing MAP4K1 gene
(According to HUGE )
About This Section --
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Specialized Databases showing MAP4K1 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for MAP4K1 gene: Search GeneIP for patents involving MAP4K1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MAP4K1 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Antibodies & Assays for MAP4K1   (HPK1)
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