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NAA11 Gene

protein-coding GIFtS: 37

GC04M075985

N(alpha)-acetyltransferase 11, NatA catalytic subunit
(Previous name: ARD1 homolog B (S. cerevisiae) )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: ARD1B)

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(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc , and/or ⁷Ensembl, ⁸miRBase)
About This Section

Aliases & Descriptions
N(alpha)-acetyltransferase 11, NatA catalytic subunit¹ ²		N-alpha-acetyltransferase 11, NatA catalytic subunit²
hARD2¹ ² ³		human arrest defective 2²
ARD2¹ ² ³		ARD1 homolog B²
ARD1B² ³		MGC10646²
N-terminal acetyltransferase complex ARD1 subunit homolog B² ³		OTTHUMP00000219263²
ARD1 homolog B (S. cerevisiae)¹		EC 2.3.1.88³
=N-terminal acetyltransferase complex ARD1 subunit homolog B²

External Ids:	HGNC: 28125¹	Entrez Gene: 84779²	Ensembl: ENSG00000156269⁷	UniProtKB: Q9BSU3³

Export aliases for NAA11 gene to outside databases

Previous GC identifer: GC04M080237

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3

Function: In complex with NAA15, displays alpha (N-terminal) acetyltransferase activity

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 60), Regulatory elements and Epigenetics data according to Qiagen and/or SABiosciences)
About This Section

Regulatory elements:

Search SABiosciences Regulatory transcription factor binding sites for NAA11
Other transcription factors

Search SABiosciences Chromatin IP Primers for NAA11

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q21.21 Ensembl cytogenetic band: 4q21.21 HGNC cytogenetic band: 4q21.23

NAA11 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NAA11 gene location

GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure

GeneLoc location for GC04M075985: view genomic region (about GC identifiers)

Start:	75,985,419 bp from pter
End:	75,994,324 bp from pter
Size:	8,906 bases
Orientation:	minus strand

1 alternative location:

Chr4- 80,146,848-80,247,204

RefSeq DNA sequence:

NC_000004.11 NT_016354.19

(According to ¹UniProtKB, neXtProt, and/or Ensembl, Phosphorylation sites according to ²Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Millipore, Sigma-Aldrich, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, and/or ProSpec,
Biochemical Assays by Millipore, Sigma-Aldrich, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Dec 2010 and Entrez Gene, Antibodies by Millipore, Sigma-Aldrich, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, and/or Epitomics)
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UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3 (See protein sequence)

Recommended Name: N-alpha-acetyltransferase 11, NatA catalytic subunit

Size: 229 amino acids; 25979 Da

Subunit: Interacts with NAA15 and HIF1A

Subcellular location: Cytoplasm. Nucleus

Sequence caution: Sequence=AAH04552.2; Type=Erroneous initiation; Sequence=AAH63623.1; Type=Erroneous initiation;

Sequence=AAH80651.1; Type=Erroneous initiation;

Secondary accessions: Q66K19 Q6P479

Explore the universe of human proteins at neXtProt for NAA11: NX_Q9BSU3

Post-translational modifications:

View phosphorylation sites using PhosphoSite²

REFSEQ proteins: NP_116082.1

ENSEMBL proteins:

ENSP00000286794 ENSP00000422022

Human Recombinant Proteins

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2 Gene Ontology (GO) cellular component terms (GO ID links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005634	nucleus	IEA	--
GO:0005737	cytoplasm	IEA	--

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NAA11 for ontologies About GeneDecksing

Antibodies for NAA11:

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	Browse ELISAs and CLIAs at Uscn

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

NAA11 for domains About GeneDecksing

2 InterPro domains/families:

IPR000182 AcTrfase_GCN5-related_dom

IPR016181 Acyl_CoA_acyltransferase

Graphical View of Domain Structure for InterPro Entry Q9BSU3

ProtoNet protein and cluster: Q9BSU3

1 Blocks protein family: IPB000182 GCN5-related N-acetyltransferase

UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3

Similarity: Belongs to the acetyltransferase family. ARD1 subfamily

Similarity: Contains 1 N-acetyltransferase domain

(According to UniProtKB, IUBMB,and/or Genatlas, Animal models from MGI Dec 24 2010,
shRNA from OriGene, Sigma-Aldrich, RNAi from Millipore, siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich, microRNA from Sigma-Aldrich, Qiagen, SABiosciences, Clones from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, Cell Lines from GenScript, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene.)
About This Section

UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3

Function: In complex with NAA15, displays alpha (N-terminal) acetyltransferase activity

Catalytic activity: Acetyl-CoA + peptide = N(alpha)-acetylpeptide + CoA

Enzyme Number (IUBMB): EC 2.3.1.88

Inhib. RNA:		Browse for Gene Knock-down Tools from Millipore
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miRNA:		Browse microRNA Mimics at Sigma-Aldrich Browse microRNA target validation systems at Sigma-Aldrich
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Gene
Editing:

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		OriGene GFP tagged cDNA clones in CMV expression vector: NAA11 OriGene Myc/DDK tagged cDNA clones in CMV expression vector: NAA11 OriGene untagged cDNA clones in CMV expression vector: NAA11 Browse 3'-UTR reporter clones for miRNA target validation Browse MicroRNA Expression Plasmids
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Cell
Lines:

GenScript Custom overexpressing Cell Line Services for NAA11

5 Gene Ontology (GO) molecular function terms (GO ID links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0004596	peptide alpha-N-acetyltransferase activity	IEA	--
GO:0005515	protein binding	IPI	16638120
GO:0008080	N-acetyltransferase activity	IEA	--
GO:0008415	acyltransferase activity	IEA	--
GO:0016740	transferase activity	IEA	--

About this table

NAA11 for ontologies About GeneDecksing

(Pathways according to Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB, Sets of similar genes according to GeneDecks, PCR Arrays from SABiosciences, Proteins Network according to SABiosciences, Sigma-Aldrich, Interactions according to ¹UniProtKB, ²MINT, and/or ³STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene).
About This Section

SABiosciences Custom Pathway-Focused PCR Arrays for NAA11

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for NAA11

1 Interacting protein for NAA11 (Q9BSU3¹) via UniProtKB, MINT, and/or STRING

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
NARG1	Q9BXJ9¹	EBI-2585120,EBI-1042540

About this table

1 Gene Ontology (GO) biological process term (GO ID links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0008152	metabolic process	IEA	--

About this table

NAA11 for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse Small Molecules at Sigma-Aldrich

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(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Millipore,
siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene, microRNA from Sigma-Aldrich, Qiagen, SABiosciences,
Tagged/untagged cDNA clones from OriGene, Sigma-Aldrich, GenScript, Primers from OriGene and/or SABiosciences)
About This Section

Inhib. RNA:		Browse for Gene Knock-down Tools from Millipore
		Browse Nano Scale siRNA at Sigma-Aldrich Sigma-Aldrich esiRNA and siRNA for NAA11 Sigma-Aldrich shRNA for NAA11
		OriGene 29mer shRNA kits in GFP-retroviral vector (see all 3): NAA11 OriGene shRNA RFP (see all 3): NAA11 OriGene basic RS shRNA (see all 3): NAA11 OriGene siRNA (see all 3): NAA11
		QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of NAA11

miRNA:		Browse microRNA Mimics at Sigma-Aldrich Browse microRNA target validation systems at Sigma-Aldrich
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of NAA11
		Search SABiosciences for Assays for microRNAs that regulate NAA11

Clones:		Browse FLAG tag genes at Sigma-Aldrich
		OriGene GFP tagged cDNA clones in CMV expression vector: NAA11 OriGene Myc/DDK tagged cDNA clones in CMV expression vector: NAA11 OriGene untagged cDNA clones in CMV expression vector: NAA11 Browse 3'-UTR reporter clones for miRNA target validation Browse OriGene MicroRNA Expression Plasmids
		GenScript Custom cDNA clone Services for NAA11

Primers:		OriGene genome-wide validated SYBR primer pairs: NAA11 Browse OriGene validated miRNA SYBR primer pairs
		Search SABiosciences RT² qPCR Primer Assays for NAA11

REFSEQ mRNAs for NAA11 gene:

NM_032693.2

Additional cDNA sequence:

BC004552.2 BC063623.1 BC080651.1 CR605070.1

2 DOTS entries:

DT.92070422 DT.100724808

18 AceView cDNA sequences:

BU188397 BC063623 BC004552 BE274897 BE894043 CR605070 BC080651 BE408199

BX283809 BX398773 BX359054 BG717714 BE274723 BX377969 CB156091 BE728501

BX337855 BF125333

Unigene Cluster for NAA11:

N(alpha)-acetyltransferase 11, NatA catalytic subunit

Hs.676048 [show with all ESTs]

Unigene Representative Sequence: BC063623

GeneLoc Exon Structure

3 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000286794(uc003hlt.3) ENST00000513733 ENST00000511542

(Experimental results according to ¹GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to ²GeneAnnot , ³GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 228 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Primers from OriGene and/or SABiosciences )
About This Section

NAA11 expression in normal and diseased human tissues

¹ / ²

2 probe-sets matching NAA11 gene

Affymetrix probe-set	Array	# genes	Sensitivity	Specificity	Correlation	Length	Gb_Accession	Consensus	Uniqueness	Score	Rank
Affymetrix probe-set	Array	GeneAnnot data			GeneNote data		GeneTide data
210603_at²	U133-A	1	0.91	1.00	--	--	--	--	--	--	--
210603_at²	U133Plus2	1	0.91	1.00	--	--	--	--	--	--	--

About this table
Data from Genenote (Publications) and GNF BioGPS
About these images

NAA11 gene electronic northern expression

About these images

CGAP SAGE TAG: CCCTCTTCCT

SOURCE GeneReport for Unigene cluster: Hs.676048

UniProtKB/Swiss-Prot: NAA11_HUMAN, Q9BSU3

Tissue specificity: Present in several cell lines, with highest levels in MCF-7 cells (at protein level)

Primers:		OriGene genome-wide validated SYBR primer pairs: NAA11 Browse OriGene validated miRNA SYBR primer pairs
		Search SABiosciences RT² qPCR Primer Assays for NAA11

SABiosciences Custom PCR Arrays for NAA11

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD and/or ⁵MGI Dec 24 2010, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section

Orthologs for NAA11 gene from 5/10 species (see all 10)

Organism	Gene	Locus	Description	Human Similarity	NCBI accessions
dog (Canis familiaris)	ARD1B¹	--	ARD1 homolog B (S. cerevisiae)	85.01(n) 86.03(a)	608326 XM_845315.1 XP_850408.1
cow (Bos taurus)	ARD1B¹	--	ARD1 homolog B (S. cerevisiae)	87.92(n) 90.39(a)	528769 XM_607200.2 XP_607200.2
rat (Rattus norvegicus)	Ard1b¹	--	ARD1 homolog B (S. cerevisiae)	82.82(n) 85.15(a)	289482 NM_001024742.1 NP_001019913.1
mouse (Mus musculus)	Naa11⁵ Ard1b¹	5 (47.62 cM)⁵	N(alpha)-acetyltransferase 11, NatA catalytic subunit⁵ ARD1 homolog B (S. cerevisiae)¹	84.56(n)¹ 87.16(a)¹	97243¹ NM_001033191.2¹ NP_001028363.1¹ AI597025⁵ AK133248⁵ (see all 15)
baker's yeast (Saccharomyces cerevisiae)	ARD1¹	--	Ard1p	57.4(n) 59.6(a)	856404 NP_011877.1

About this table Species with no ortholog for NAA11

ENSEMBL Gene Tree for NAA11 (if available)

(Paralogs according to ¹HomoloGene
and ²Ensembl, Pseudogenes according to ³Pseudogene.org)
About This Section

Paralogs for NAA11 gene

NAA10²

NAA11 for paralogs About GeneDecksing

(SNPs according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section

SNP ID	Valid	Chr 4 pos	Sequence	Recs	AA Chg	Type	More	Recs	Allele freq	Pop	Total sample	More
Genomic Data				Transcription Related Data				Allele Frequencies
			--	--	--		--	--
rs1385056^1,2	C,F,O,	80238693(+)	`GCAGCG/ATAGTG`	1	--	ut3¹ ese³		9		NS EA NA WA	612
rs1484147^1,2	C	80239013(+)	`AAGAAT/CACTGG`	1	--	int¹		5		MN NS EA	600
rs3811765^1,2	H	80247016(-)	`GCAACG/ACTCAG`	2	/T /A	mis¹ ref¹		5		EA NS	1912
rs4473673^1,2	C	80240743(+)	`TACTTC/TTGACA`	1	--	int¹		4		NS EA	418
rs6818915^1,2	C,F,	80248913(+)	`AAAATG/TAATTA`	1	--	ng5¹		5		NS EA WA	468
rs6820325^1,2	C,F,A,H,	80243645(+)	`GGTGTA/GTGTGT`	1	--	int¹		7		NS EA NA WA	542
rs6846772^1,2	C,F,	80243661(+)	`tgtgtA/GtATAT`	1	--	int¹		1		NA	72
rs6853324^1,2	C,F,	80244285(+)	`AATTAT/AATACA`	1	--	int¹		5		NS EA WA	470
rs10651966^1,2	--	80243643(+)	`AGGTG-/TATGTGT`	1	--	int¹		0	--	--	--	--
rs13106792^1,2	C,F,A,	80239092(+)	`CATGGA/CAGTCA`	1	--	int¹		19		NA NS EA WA	1054

About this table

HapMap Linkage Disequilibrium images for NAA11 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for NAA11: --

QIAGEN SeqTarget long-range PCR primers for resequencing NAA11

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, LSDB, HGMD, GAD, HuGE Navigator, and/or TGDB.)
About This Section

(Possibly Related Articles in Doctor's Guide)
About This Section

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶UniProtKB/TrEMBL, and/or ⁷Novoseek)
About This Section

6 PubMed articles for NAA11 gene integrated from 7 sources:
(articles sorted by number of sources associating them with NAA11)

A synopsis of eukaryotic Nalpha-terminal acetyltransferases: nomenclature, subunits and substrates. (PubMed id 19660095)^{1, 2, 3} Polevoda B.... Sherman F. (2009)
Characterization of hARD2, a processed hARD1 gene duplicate, encoding a human protein N-alpha-acetyltransferase. (PubMed id 16638120)^{1, 2, 3} Arnesen T.... Lillehaug J.R. (2006)
LOH analysis of genes around D4S2964 identifies ARD1B as a prognostic predictor of hepatocellular carcinoma. (PubMed id 20419844)¹ Huang G.L....Wang H.Y. (2010)
Lysine acetylation targets protein complexes and co-regulates major cellular functions. (PubMed id 19608861)² Choudhary C.... Mann M. (2009)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)² Gerhard D.S....Malek J. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 84779	HGNC: 28125	AceView: MGC10646	Ensembl:ENSG00000156269	euGenes: HUgn84779
ECgene: NAA11	H-InvDB: NAA11

(According to HUGE)
About This Section

(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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Intellectual Property for NAA11 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from XenneX, Inc.)

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Patent Information for NAA11 gene:
Search GeneIP for patents involving NAA11

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
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	QIAGEN Custom miScript Target Protector blocks miRNA-binding site of NAA11
	SeqTarget long-range PCR primers for resequencing NAA11
	QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays
	QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of NAA11

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NAA11 Gene

protein-coding GIFtS: 37

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NAA11 Gene

protein-coding GIFtS: 37

Aliases & Descriptionsfor NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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for NAA11 gene

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