Aliases &
Descriptions
for NCRNA00095 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
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|
| Aliases & Descriptions |
|---|
| non-protein coding RNA 951 2 | | MGC1254721 2 | | MGC1254691 2 | | MGC1254701 2 |
Export aliases for NCRNA00095 gene to outside databasesPrevious GC identifer: GC16M030843 |
Summaries
for NCRNA00095 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
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|
-- |
Genomic Views
for NCRNA00095 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
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Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for NCRNA00095
Other transcription factors
Search SABiosciences Chromatin IP Primers for NCRNA00095
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 16p11.2 HGNC cytogenetic band: 16p11.2NCRNA00095 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure GeneLoc location for GC16M030930: view genomic region
(about GC identifiers)
Start:
|
30,930,640 bp from pter |
End:
|
30,934,590 bp from pter |
Size:
|
3,951 bases |
Orientation:
|
minus strand |
1 alternative location:
| Chr16- 28,493,299-28,497,249 |
RefSeq DNA sequence:- NC_000016.9 NT_010393.16
|
Proteins
for NCRNA00095 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
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UniProtKB/Swiss-Prot: YP028_HUMAN, Q494R0 (See
protein sequence)Recommended Name: Putative uncharacterized protein encoded by NCRNA00095 Size: 122 amino acids; 13218 Da
Caution: Product of a dubious CDS prediction. Probable non-coding RNA
Secondary accessions: Q3KR42 Q8NAQ9Explore the universe of human proteins at neXtProt for NCRNA00095: NX_Q494R0
Human Recombinant Proteins
Antibodies for NCRNA00095:
Assays for NCRNA00095: |
Protein
Domains/
Families
for NCRNA00095 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: Q494R0 |
Gene Function
for NCRNA00095 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
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|
|
Pathways & Interactions
for NCRNA00095 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
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SABiosciences Custom Pathway-Focused PCR Arrays for NCRNA00095
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for NCRNA00095
|
Drugs & Compounds
for NCRNA00095 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
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|
 Browse Tocris compounds for NCRNA00095
|
Transcripts
for NCRNA00095 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
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|
Additional cDNA sequence: AK090544.1 AK092263.1 BC101464.1 BC101988.1 BC105687.1 BC105926.1 1 DOTS entry: DT.97800001 12 AceView cDNA sequences: BX641974 AX747439 NM_175901 AK092263 BI325012 AK090544 BX641975 BE384747 AW176596 BQ217225 BI438270 BF771557 Unigene Cluster for NCRNA00095: Non-protein coding RNA 95 Hs.711535 [show with all ESTs]Unigene Representative Sequence: AK092263
GeneLoc Exon Structure
|
Expression
for NCRNA00095 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| NCRNA00095 expression in normal and diseased human tissues
1 / 2 1 probe-set matching NCRNA00095 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 1553586_at2
|
U133Plus2 |
1 |
0.82 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: GGATGTGTAG
SOURCE GeneReport for Unigene cluster: Hs.711535
SABiosciences Custom PCR Arrays for NCRNA00095
|
Orthologs
for NCRNA00095 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
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--
|
Paralogs
for NCRNA00095 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| -- |
Genomic Variants
for NCRNA00095 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
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Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 2 variations for NCRNA00095
2 CNVs: 4942 4941 |
Disorders & Mutations
for NCRNA00095 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
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Medical News
for NCRNA00095 gene(Possibly Related Articles in
Doctor's Guide)
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| -- |
Publications
for NCRNA00095 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
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3 PubMed articles for NCRNA00095 gene integrated from 7 sources:
(articles sorted by number of sources associating them with NCRNA00095)- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
- Purification of CpG islands using a methylated DNA binding column. (PubMed id 8012384)1 Cross S.H.... Bird A.P. (1994)
|
External Searches for NCRNA00095 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
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|
Genome Databases showing NCRNA00095 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
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|
|
Other Databases showing NCRNA00095 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing NCRNA00095 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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|
|
About This Section
| Patent Information for NCRNA00095 gene:
Search GeneIP for patents involving NCRNA00095
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for NCRNA00095 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
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