Aliases & Descriptions for SEPT8 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases & Descriptions |
|---|
| septin 81 2 | | OTTHUMP000002117552 | | KIAA02021 2 3 5 | | OTTHUMP000000660762 | | SEP21 2 | | OTTHUMP000000660802 | | septin-82 | | |
Export aliases for SEPT8 gene to outside databasesPrevious GC identifers: GC05M131608 GC05M132533 GC05M132117 GC05M132162 GC05M132114 |
Summaries for SEPT8 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| Entrez Gene summary for SEPT8: SEPT8 is a member of the highly conserved septin family. Septins are 40- to 60-kD GTPases that assemble as filamentousscaffolds. They are involved in the organization of submembranous structures, in neuronal polarity, and in vesicletrafficking (Blaser et al., 2003 (PubMed 12909369)).(supplied by OMIM) UniProtKB/Swiss-Prot: SEPT8_HUMAN, Q92599Function: Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play arole in platelet secretion Gene Wiki entry for SEPT8 |
Genomic Views for SEPT8 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences) About This Section
| Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for SEPT8 Other transcription factors
Search SABiosciences Chromatin IP Primers for SEPT8
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for SEPT8  |
Genomic Location: Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 5q31 Ensembl cytogenetic band: 5q31.1 HGNC cytogenetic band: 5q31SEPT8 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05M127279: view genomic region
(about GC identifiers)
Start:
|
127,279,118 bp from pter |
End:
|
127,306,224 bp from pter |
Size:
|
27,107 bases |
Orientation:
|
minus strand |
1 alternative location:
| Chr5- 132,086,509-132,142,933 |
RefSeq DNA sequence:- NC_000005.9 NT_034772.6
|
Proteins for SEPT8 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
| UniProtKB/Swiss-Prot: SEPT8_HUMAN, Q92599 (See
protein sequence)Recommended Name: Septin-8 Size: 483 amino acids; 55756 Da
Subunit: Septins polymerize into heterooligomeric protein complexes that form filaments, and can associate withcellular membranes, actin filaments and microtubules. GTPase activity is required for filament formation (Bysimilarity). Interacts with CDK14, SEPT4, SEPT5 and SEPT7 (By similarity)
Subcellular location: Cytoplasm (By similarity). Cytoplasm, cytoskeleton (By similarity). Note=In platelets, found inareas surrounding alpha-granules
Sequence caution: Sequence=AAG09407.1; Type=Erroneous initiation; Sequence=AAH01329.1; Type=Erroneous initiation;Sequence=AAO13878.1; Type=Erroneous initiation; Sequence=AAO13879.1; Type=Erroneous initiation; Sequence=AAO13880.1;Type=Erroneous initiation; Sequence=BAA13193.1; Type=Erroneous initiation;
Secondary accessions: A6NC65 A6NKP6 Q8IX36 Q8IX37 Q9BVB3Alternative splicing: 3 isoforms: Q92599-1 Q92599-2 Q92599-3 Explore the universe of human proteins at neXtProt for SEPT8: NX_Q92599 
Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins (4 alternative transcripts):
NP_001092281.1 NP_001092282.1 NP_001092283.1 NP_055961.1
ENSEMBL proteins: ENSP00000367971 ENSP00000360548 ENSP00000367978 ENSP00000391926 ENSP00000296873 ENSP00000399840 ENSP00000367993 ENSP00000367991 ENSP00000411823 ENSP00000407421 ENSP00000394766 ENSP00000367973
Human Recombinant Proteins
3 Gene Ontology (GO) cellular component terms (GO ID links to tree view): About this table
SEPT8 for ontologies About GeneDecksing
Antibodies for SEPT8: Assays for SEPT8: |
Protein
Domains/ Families for SEPT8 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
SEPT8 for domains About GeneDecksing
2 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q92599ProtoNet protein and cluster: Q92599 1 Blocks protein family: IPB000038 Cell division/GTP binding protein
UniProtKB/Swiss-Prot: SEPT8_HUMAN, Q92599Similarity: Belongs to the septin family |
Gene Function for SEPT8 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
| UniProtKB/Swiss-Prot: SEPT8_HUMAN, Q92599Function: Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play arole in platelet secretion
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view): About this table
SEPT8 for ontologies About GeneDecksing
|
Pathways & Interactions for SEPT8 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SEPT8 for pathways About GeneDecksing
1 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathway for SEPT8
SABiosciences Custom Pathway-Focused PCR Arrays for SEPT8 
Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for SEPT8 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SEPT8
2 Interacting proteins for SEPT8 (Q925991) via UniProtKB, MINT, and/or STRINGAbout this table
1 Gene Ontology (GO) biological process term (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0007049 | cell cycle |
IEA | -- | About this table
SEPT8 for ontologies About GeneDecksing
|
Drugs & Compounds for SEPT8 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for SEPT8
|
Transcripts for SEPT8 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences) About This Section
|
REFSEQ mRNAs for SEPT8 gene (4 alternative transcripts): NM_001098811.1 NM_001098812.1 NM_001098813.1 NM_015146.1 Additional cDNA sequence: AF179995.1 AF440761.1 AF440762.1 AF440763.1 AK057797.1 BC001329.1 BC140759.1 BC171779.1 CR590471.1 CR617026.1 D86957.1 23 DOTS entries: DT.95309873 DT.91955824 DT.445350 DT.110097 DT.91653311 DT.95309869 DT.95309871 DT.99955875 DT.120876759 DT.95245773 DT.120876757 DT.120876720 DT.100807333 DT.99999349 DT.100807330 DT.100807331 DT.100807332 DT.120876724 DT.120876745 DT.120876755 DT.40303743 DT.92443141 DT.120876765 1 AceView cDNA sequence: AW752481
highest scoring ESTs for SEPT8:D86957 AF179995 AF440761 AF440762 AF440763 AI912094 AK057797 AL520957 AL527033 AL532971 Unigene Cluster for SEPT8: Septin 8 Hs.522057 [show with all ESTs]Unigene Representative Sequence: AF179995
GeneLoc Exon Structure
5/11 Alternative Splicing Database (ASD) splice patterns (SP) for SEPT8 (see all 11)
| ExUns: | 1 | ^ | 2a | · | 2b | · | 2c | · | 2d | ^ | 3a | · | 3b | · | 3c | · | 3d | ^ | 4 | ^ | 5a | · | 5b | ^ | 6a | · | 6b | · | 6c | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | ^ | 11 | ^ | 12a | · | 12b | ^ | 13a | · | |
| SP1: | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   |
| ExUns: | 13b | ^ | 14 | |
| SP1: | |   | |   | |
| SP2: | |   | |   | |
| SP3: | - |   | |   | |
| SP4: | |   | |   | |
| SP5: | |   | |   |
About this scheme
ECgene alternative splicing isoforms for SEPT8
16 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000378699 ENST00000371493 ENST00000378706 ENST00000371478 ENST00000412572 ENST00000492490 ENST00000296873(uc003kxs.1 uc003kxu.2 uc011cxi.1 uc003kxv.2) ENST00000448933(uc003kxt.2) ENST00000378721 ENST00000378719(uc003kxr.2) ENST00000414594 ENST00000453480 ENST00000481030 ENST00000458488 ENST00000378701 ENST00000481794
|
Expression for SEPT8 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| SEPT8 expression in normal and diseased human tissues
1 / 2 / 3 6 probe-sets matching SEPT8 gene
Affymetrix probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 38067_at2, 3
|
U95-A |
1 |
1.00 |
1.00 |
0.41 |
1.03 |
D86957 |
1.00 |
1.00 |
1.00 |
1 |
| 62160_at2, 3
|
U95-C |
1 |
0.31 |
1.00 |
0.97 |
1.00 |
AI912094 |
0.80 |
1.00 |
0.91 |
1 |
| 208999_at2, 3
|
U133-A |
1 |
1.00 |
1.00 |
-- |
-- |
D86957 |
1.00 |
1.00 |
1.00 |
1 |
| 209000_s_at2, 3
|
U133-A |
1 |
1.00 |
1.00 |
-- |
-- |
BC001329 |
0.60 |
1.00 |
0.82 |
1 |
| 208999_at2
|
U133Plus2 |
1 |
1.00 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
| 209000_s_at2
|
U133Plus2 |
1 |
1.00 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
SEPT8 for expression About GeneDecksing
Data from
Genenote 
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CTTTTCTAAA
SOURCE GeneReport for Unigene cluster: Hs.522057
Expression variation in blood from EXPOLDB for SEPT8 UniProtKB/Swiss-Prot: SEPT8_HUMAN, Q92599Tissue specificity: Widely expressed, including in brain, heart and platelets; most abundant in aorta. Isoform 2 isexpressed at low levels in specific brain areas, such as occipital pole, frontal lobe, temporal lobe and putamen.Isoform 1 and 3 are highly expressed in specific brain areas, such as occipital pole, frontal lobe, temporal lobe andputamen. Isoform 2 is highly expressed in prostate, testis and ovary. Isoform 1 and isoform 3 are expressed at lowlevels in prostate, testis and ovary SABiosciences Custom PCR Arrays for SEPT8 
|
Orthologs for SEPT8 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for SEPT8 gene from 5/10 species (see all 10)
About this table Species with no ortholog for SEPT8
ENSEMBL Gene Tree for SEPT8 (if available) |
Paralogs for SEPT8 gene(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for SEPT8 gene
- SEPT32 SEPT62 SEPT92 SEPT112 SEPT142 SEPT102 SEPT122
SEPT8 for paralogs About GeneDecksing
|
Genomic Variants for SEPT8 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 5 pos | Sequence | Recs | AA Chg | Type | More | Recs | Allele freq | Pop | Total sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for SEPT8 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for SEPT8 1 CNV: 69201 |  | QIAGEN SeqTarget long-range PCR primers for resequencing SEPT8  |
|
Disorders & Mutations for SEPT8 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
SEPT8 for disorders About GeneDecksing
OMIM: 608418
1 Novoseek disease relationship for SEPT8 gene
| Disease |
-log (P-Val) |
Hits |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| leukemia |
18 |
1 |
12023038 (1) |
About this table
Human Genome Epidemiology (HuGE) Navigator: SEPT8 (2 documents) Export disorders and mutations for SEPT8 gene to outside databases
|
Medical News for SEPT8 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for SEPT8 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
| 10/27 PubMed articles for SEPT8 gene, integrated from 7 sources (see all 27): (articles sorted by number of sources associating them with SEPT8)- Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain. (PubMed id 9039502)1, 2, 3 Nagase T....Nomura N. (1996)
- Isolation of new splice isoforms, characterization and expression analysis of the human septin SEPT8 (KIAA0202). (PubMed id 12909369)1, 2, 7 Blaeser S....Zieger B. (2003)
- The novel human platelet septin SEPT8 is an interaction partner of SEPT4. (PubMed id 15116257)1, 2, 7 Blaser S....Zieger B. (2004)
- Human septin-septin interaction: CDCrel-1 partners with KIAA0202. (PubMed id 12023038)1, 2, 7 Blaeser S.... Zieger B. (2002)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Mammalian septins nomenclature. (PubMed id 12475938)1, 2 Macara I.G.... Zieger B. (2002)
- KIAA0202, a human septin family member, interacting with hPFTAIRE1. (PubMed id 12098780)1, 2 Yang T.... Chen J.Y. (2002)
- Identification of 40 genes on a 1-Mb contig around the IL-4 cytokine family gene cluster on mouse chromosome 11. (PubMed id 10704283)1, 2 Wenderfer S.E.... Monaco J.J. (2000)
- Computational and biological analysis of 680 kb of DNA sequence from the human 5q31 cytokine gene cluster region. (PubMed id 9149945)1, 3 Frazer K.A....Rubin E.M. (1997)
- Septin expression in proliferative retinal membranes. (PubMed id 17625225)1, 7 Xin X....Meyer P. (2007)
|
External Searches for SEPT8 gene
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing SEPT8 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing SEPT8 gene
(According to HUGE)
About This Section
| |
Specialized Databases showing SEPT8 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
|
About This Section
| Patent Information for SEPT8 gene: Search GeneIP for patents involving SEPT8
GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products for SEPT8 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn, Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences) About This Section
|
 | |
 |
| | | |  |
 |
| | |
 |  |  |  | |
| | | Search Tocris compounds for SEPT8 |
| |  |  |  |  | | | | |
 | |
|
|