SLC16A7 Gene
protein-coding GIFtS : 53
GC12P057131
solute carrier family 16, member 7 (monocarboxylic acid transporter 2) (Previous names: solute carrier family 16 (monocarboxylic acid transporters), member 7 )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
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Aliases & Descriptionsfor SLC16A7 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions solute carrier family 16, member 7 (monocarboxylic acid transporter 2)1 2 MCT21 2 3 5 solute carrier family 16 (monocarboxylic acid transporters), member 71 2 Solute carrier family 16 member 72 3 MCT 22 3 monocarboxylate transporter 22
Export aliases for SLC16A7 gene to outside databases Previous GC identifers: GC12P059779 GC12P060132 GC12P058276 GC12P058369
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Summariesfor SLC16A7 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: MOT2_HUMAN, O60669 Function : Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of manymonocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate. MCT2 is a high affinity pyruvate transporter
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Genomic Viewsfor SLC16A7 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the SLC16A7 gene promoter: Bach1 Nkx3-1 v4 Nkx3-1 v3 Nkx3-1 v2 Nkx3-1 v1 Nkx3-1 Sox9 POU2F1 CUTL1 Pbx1a Other transcription factors Search SABiosciences Chromatin IP Primers for SLC16A7 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 12q13 Ensembl cytogenetic band: 12q14.1 HGNC cytogenetic band: 12q13 SLC16A7 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12P057131: view genomic region
(about GC identifiers )
Start:
57,131,582 bp from pter
End:
57,223,874 bp from pter
Size:
92,293 bases
Orientation:
plus strand
1 alternative location : Chr 12+ 60,083,126-60,175,407
RefSeq DNA sequence: NC_000012.11 NT_029419.12
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Proteinsfor SLC16A7 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: MOT2_HUMAN, O60669 (See
protein sequence )Recommended Name: Monocarboxylate transporter 2 Size : 478 amino acids; 52200 Da
Subunit : Interacts with GRID2IP (By similarity)
Subcellular location : Cell membrane; Multi-pass membrane protein
Secondary accessions : Q9UPB3Explore the universe of human proteins at neXtProt for SLC16A7: NX_O60669 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_004722.2 ENSEMBL proteins: ENSP00000261187 Human Recombinant Proteins 4 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
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SLC16A7 for ontologies About GeneDecksing Antibodies for SLC16A7: Assays for SLC16A7:
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Protein
Domains/ Familiesfor SLC16A7 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
SLC16A7 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry O60669 ProtoNet protein and cluster: O60669
UniProtKB/Swiss-Prot: MOT2_HUMAN, O60669 Similarity : Belongs to the major facilitator superfamily. Monocarboxylate porter (TC 2.A.1.13) family
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Gene Functionfor SLC16A7 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: MOT2_HUMAN, O60669 Function : Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of manymonocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and the ketone bodies acetoacetate, beta-hydroxybutyrate and acetate. MCT2 is a high affinity pyruvate transporter
Genatlas biochemistry entry for SLC16A7 :solute carrier family 16,member A7,monocarboxylic acids transporter,high affinity pyruvate transporter,restricted in normal tissues,widely expressed in cancer cell lines 4 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005477 pyruvate secondary active transmembrane transporter activity
TAS 9786900 GO:0008028 monocarboxylic acid transmembrane transporter activity
TAS -- GO:0015293 symporter activity
IEA -- GO:0015355 secondary active monocarboxylate transmembrane transporter activity
IEA --
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SLC16A7 for ontologies About GeneDecksing
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Pathways & Interactionsfor SLC16A7 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
SLC16A7 for pathways About GeneDecksing 2 Millipore Pathways for SLC16A7 SABiosciences Custom Pathway-Focused PCR Arrays for SLC16A7 Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SLC16A7 5/17 Interacting proteins for SLC16A7 (ENSP00000261187 3 ) via UniProtKB, MINT, and/or STRING (see all 17 )About this table 3 Gene Ontology (GO) biological process terms (GO ID links to tree view) :
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SLC16A7 for ontologies About GeneDecksing
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Drugs & Compoundsfor SLC16A7 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section
SLC16A7 for compounds About GeneDecksing Browse Tocris compounds for SLC16A7 5 Novoseek chemical compound relationships for SLC16A7 gene
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Transcriptsfor SLC16A7 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for SLC16A7 gene: NM_004731.3
Additional cDNA sequence: AF049608.1 AF058056.1 AK301725.1 AK310281.1 AK313345.1 BC007463.1 BC030693.2
5 DOTS entries : DT.203003 DT.91749689 DT.91749690 DT.100684814 DT.121107285
24/28 AceView cDNA sequences (see all 28 ):
BC030693 N42889 AI796731 AI473884 CD678732 CB241451 NM_004731 CF887757 CF891525 AI302205 AF058056 AL597759 F01173 AI823653 AI308108 BG401357 AL600173 BC007463 BX112287 AI760494 AF049608 BG721447 AA731520 N34486
highest scoring ESTs for SLC16A7 :AA731520 AF058056 AF049608 AI302205 AI308108 AI473884 AI760494 AI796731 AW975728 BC007463 Unigene Cluster for SLC16A7:
Solute carrier family 16, member 7 (monocarboxylic acid transporter 2) Hs.439643 [show with all ESTs ] Unigene Representative Sequence: NM_004731 GeneLoc Exon Structure 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000261187 (uc001sqs.2 uc001sqt.2 uc001squ.2 uc009zqi.2 uc010ssi.1 )
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Expression for SLC16A7 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section SLC16A7 expression in normal and diseased human tissues 1 / 2 / 3
5 probe-sets matching SLC16A7 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
35547_at2 , 3
U95-A
1
0.94
1.00
1.00
1.00
AF058056
1.00
1.00
1.00
1
210807_s_at2 , 3
U133-A
1
0.82
1.00
--
--
AF049608
0.80
1.00
0.91
1
207057_at2 , 3
U133-A
1
0.64
1.00
--
--
NM_004731
0.60
1.00
0.82
1
210807_s_at2
U133Plus2
1
0.82
1.00
--
--
--
--
--
--
--
207057_at2
U133Plus2
1
0.64
1.00
--
--
--
--
--
--
--
About this table
SLC16A7 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TACACAGAGT SOURCE GeneReport for Unigene cluster: Hs.439643 Expression variation in blood from EXPOLDB for SLC16A7
UniProtKB/Swiss-Prot: MOT2_HUMAN, O60669 Tissue specificity : High expression in testis, moderate to low in spleen, heart, kidney, pancreas, skeletal muscle,brain and Leukocyte. Restricted expression in normal tissues, but widely expressed in cancer cells
SABiosciences Custom PCR Arrays for SLC16A7
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Orthologsfor SLC16A7 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for SLC16A7 gene from 5/8 species (see all 8 )
About this table Species with no ortholog for SLC16A7 ENSEMBL Gene Tree for SLC16A7 (if available)
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Paralogsfor SLC16A7 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for SLC16A7 gene LOC440459 2 SLC16A1 2 SLC16A3 2 SLC16A12 2 SLC16A5 2 SLC16A8 2 SLC16A6 2
SLC16A7 for paralogs About GeneDecksing
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Genomic Variantsfor SLC16A7 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 2 variations for SLC16A7 2 CNVs : 86416 66240 QIAGEN SeqTarget long-range PCR primers for resequencing SLC16A7
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Disorders & Mutationsfor SLC16A7 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
SLC16A7 for disorders About GeneDecksing
OMIM: 603654 Human Genome Epidemiology (HuGE) Navigator: SLC16A7 (2 documents) Export disorders and mutations for SLC16A7 gene to outside databases
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Medical Newsfor SLC16A7 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor SLC16A7 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/41 PubMed articles for SLC16A7 gene, integrated from 7 sources (see all 41 ): (articles sorted by number of sources associating them with SLC16A7) Human monocarboxylate transporter 2 (MCT2) is a high affinity pyruvate transporter. (PubMed id 9786900) 1 , 2 , 3, 7 Lin R.-Y.... Golde D.W. (1998) Distribution of the monocarboxylate transporter MCT2 in human cerebral cortex: an immunohistochemical study. (PubMed id 18598673) 1 , 7 Chiry O....Pellerin L. (2008) The role of monocarboxylate transporter 2 and 4 in the transport of gamma-hydroxybutyric acid in mammalian cells. (PubMed id 17502341) 1 , 7 Wang Q. and Morris M.E. (2007) Hypoxia stimulates lactate release and modulates mono carboxylate transporter (MCT1, MCT2, and MCT4) expression in human adipocytes. (PubMed id 19876643) 1 , 7 PAcrez de Heredia F....Trayhurn P. (2010) Increased expression of monocarboxylate transporters 1, 2, and 4 in colorectal carcinomas. (PubMed id 18188595) 1 , 7 Pinheiro C....Baltazar F. (2008) Expression of monocarboxylate transporters 1, 2, and 4 in human tumours and their association with CD147 and CD44. (PubMed id 20454640) 1 , 7 Pinheiro C....Baltazar F. (2010) Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614) 1 Rose J.E....Uhl G.R. (2010) Monocarboxylate transport in human corneal epithelium and cell lines. (PubMed id 20035863) 1 Vellonen K.S....Urtti A. (2010 Feb 19) Sequential use of transcriptional profiling, expressi on quantitative trait mapping, and gene association implicates MMP20 in human k idney aging. (PubMed id 19834535) 1 Wheeler H.E....Kim S.K. (2009) The finished DNA sequence of human chromosome 12. (PubMed id 16541075) 2 Scherer S.E.... Gibbs R.A. (2006)
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External Searches for SLC16A7 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing SLC16A7 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing SLC16A7 gene
(According to HUGE )
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Specialized Databases showing SLC16A7 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for SLC16A7 gene: Search GeneIP for patents involving SLC16A7 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor SLC16A7 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for SLC16A7
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