TAB3 Gene
protein-coding GIFtS : 52
GC0XM028586
TGF-beta activated kinase 1/MAP3K7 binding protein 3 (Previous name: mitogen-activated protein kinase kinase kinase 7 interacting protein 3 )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbol: MAP3K7IP3 )
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Aliases & Descriptionsfor TAB3 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions TGF-beta activated kinase 1/MAP3K7 binding protein 31 2 NAP12 mitogen-activated protein kinase kinase kinase 7 interacting protein 31 2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 32 TAK1-binding protein 32 3 MGC454042 TGF-beta-activated kinase 1-binding protein 32 3 OTTHUMP000000231122 TAB-32 3 NFkB activating protein 12 MAP3K7IP32 3 Mitogen-activated protein kinase kinase kinase 7-interacting protein 33 NF-kappa-B-activating protein 12 3
Export aliases for TAB3 gene to outside databases Previous GC identifers: GC0XM030209 GC0XM030608 GC0XM030845
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Summariesfor TAB3 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for TAB3 : The product of this gene functions in the NF-kappaB signal transduction pathway. The encoded protein, and the similar and functionally redundant protein MAP3K7IP2/TAB2, forms a ternary complex with the protein kinase MAP3K7/TAK1 and either TRAF2 or TRAF6 in response to stimulation with the pro-inflammatory cytokines TNF or IL-1. Subsequent MAP3K7/TAK1 kinase activity triggers a signaling cascade leading to activation of the NF-kappaB transcription factor. The human genome contains a related pseudogene. Alternatively spliced transcript variants have been described, but their biological validity has not been determined. (provided by RefSeq) UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8 Function : Adapter linking MAP3K7/TAK1 and TRAF6 or TRAF2. Mediator of MAP3K7 activation, respectively in the IL1 andTNF signaling pathways. Plays a role in activation of NF-kappa-B and AP1 transcription factor. Isoform 2 may be an oncogenic factor Gene Wiki entry for TAB3 (MAP3K7IP3)
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Genomic Viewsfor TAB3 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for TAB3 Other transcription factors Search SABiosciences Chromatin IP Primers for TAB3 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for TAB3
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: Xp21.2 Ensembl cytogenetic band: Xp21.2 HGNC cytogenetic band: Xp21.2 TAB3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome X GeneLoc Exon Structure
GeneLoc location for GC0XM028586: view genomic region
(about GC identifiers )
Start:
28,586,659 bp from pter
End:
28,648,837 bp from pter
Size:
62,179 bases
Orientation:
minus strand
1 alternative location : Chr X- 30,845,559-30,993,201
RefSeq DNA sequence: NC_000023.10 NT_167197.1
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Proteinsfor TAB3 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8 (See
protein sequence )Recommended Name: TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 Size : 712 amino acids; 78683 Da
Subunit : Interacts with TAB1, TAB2, MAP3K7, TRAF2 and TRAF6. The minimal TAB3-containing complex (TAB1-MAP3K7-TAB3)appears not to contain TAB2. However, it seems sensible to consider that TAB2 may also join this complex and may act in a cooperative manner with TAB3. Interacts with WDR34 (via the WD domains). Interacts with RBCK1
Secondary accessions : A6NDD9 Q6VQR0Alternative splicing : 2 isoforms : Q8N5C8-1 Q8N5C8-2 Explore the universe of human proteins at neXtProt for TAB3: NX_Q8N5C8 Post-translational modifications:
Ubiquitinated; following IL1 stimulation or TRAF6 overexpression1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_690000.2 ENSEMBL proteins: ENSP00000411920 ENSP00000288422 ENSP00000368210 ENSP00000368212 ENSP00000368214 ENSP00000368215 ENSP00000395174 Human Recombinant Proteins 4 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
About this table
TAB3 for ontologies About GeneDecksing Antibodies for TAB3: Assays for TAB3:
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Protein
Domains/ Familiesfor TAB3 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
TAB3 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q8N5C8 ProtoNet protein and cluster: Q8N5C8
2 Blocks protein families : IPB001876 Zn-finger IPB003892 Ubiquitin system component Cue UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8 Similarity : Contains 1 CUE domainSimilarity : Contains 1 RanBP2-type zinc finger
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Gene Functionfor TAB3 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8 Function : Adapter linking MAP3K7/TAK1 and TRAF6 or TRAF2. Mediator of MAP3K7 activation, respectively in the IL1 andTNF signaling pathways. Plays a role in activation of NF-kappa-B and AP1 transcription factor. Isoform 2 may be an oncogenic factor
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
TAB3 for ontologies About GeneDecksing
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Pathways & Interactionsfor TAB3 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
TAB3 for pathways About GeneDecksing 1 Kegg Pathway (Kegg details for TAB3) : hsa04621 NOD-like receptor signaling pathway
SABiosciences Custom Pathway-Focused PCR Arrays for TAB3 Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for TAB3 4 Interacting proteins for TAB3 (ENSP00000288422 3 Q8N5C8 1 , 2 ) via UniProtKB, MINT, and/or STRING About this table 5/7 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 7 ):
GO ID Qualified GO term Evidence PubMed IDs GO:0000187 activation of MAPK activity
TAS -- GO:0002756 MyD88-independent toll-like receptor signaling pathway
TAS -- GO:0007254 JNK cascade
TAS -- GO:0034138 toll-like receptor 3 signaling pathway
TAS -- GO:0045087 innate immune response
TAS --
About this table
TAB3 for ontologies About GeneDecksing
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Drugs & Compoundsfor TAB3 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section
TAB3 for compounds About GeneDecksing Browse Tocris compounds for TAB3 1 Novoseek chemical compound relationship for TAB3 gene
About this table
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Transcriptsfor TAB3 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for TAB3 gene: NM_152787.3
Additional cDNA sequence: AK096786.1 AK297274.1 AL832071.1 AY371491.1 AY437560.1 BC032526.1
6 DOTS entries : DT.97806119 DT.97799162 DT.75130520 DT.101981398 DT.121304684 DT.86840948
24/71 AceView cDNA sequences (see all 71 ):
BQ025617 CB163503 BG493286 BX456736 AY371491 C00236 AW518138 BP375414 BM450259 BU688642 AW148358 AI470410 AI421406 AI419265 AI733853 BG436116 BC032526 BU861012 BF939787 BI493769 BU849692 AW614074 AY331591 BI092372 Unigene Cluster for TAB3:
TGF-beta activated kinase 1/MAP3K7 binding protein 3 Hs.188256 [show with all ESTs ] Unigene Representative Sequence: AL832071 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for TAB3 ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 SP1 :               SP2 :         -      
About this scheme ECgene alternative splicing isoforms for TAB3 8 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000452127 ENST00000288422 ENST00000378928 ENST00000378930 ENST00000378932 ENST00000378933 (uc004dcj.2 uc004dck.2 uc010ngl.2 ) ENST00000427195 ENST00000467136
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Expression for TAB3 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section TAB3 expression in normal and diseased human tissues 1 / 2
8 probe-sets matching TAB3 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
47843_at2
U95-B
1
1.00
1.00
0.73
0.86
--
--
--
--
--
88365_at2
U95-E
1
0.88
1.00
0.78
0.56
--
--
--
--
--
76839_at2
U95-E
1
0.62
1.00
0.85
1.59
--
--
--
--
--
227357_at2
U133-B
1
0.46
1.00
--
--
--
--
--
--
--
1552928_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
1552927_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
227357_at2
U133Plus2
1
0.46
1.00
--
--
--
--
--
--
--
1558518_at2
U133Plus2
1
0.36
1.00
--
--
--
--
--
--
--
About this table
TAB3 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CATCGTACCT SOURCE GeneReport for Unigene cluster: Hs.188256 UniProtKB/Swiss-Prot: TAB3_HUMAN, Q8N5C8 Tissue specificity : Widely expressed. Constitutively overexpressed in certain tumor tissues. Isoform 1 is a majortranscript while isoform 2 is a minor transcript
SABiosciences Custom PCR Arrays for TAB3
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Orthologsfor TAB3 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for TAB3 gene from 5/7 species (see all 7 )
About this table Species with no ortholog for TAB3 ENSEMBL Gene Tree for TAB3 (if available)
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Paralogsfor TAB3 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for TAB3 gene TAB2 2
TAB3 for paralogs About GeneDecksing
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Genomic Variantsfor TAB3 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr X pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for TAB3 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for TAB3 1 CNV : 3265
QIAGEN SeqTarget long-range PCR primers for resequencing TAB3
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Disorders & Mutationsfor TAB3 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
TAB3 for disorders About GeneDecksing
OMIM: 300480 2 Novoseek disease relationships for TAB3 gene
About this table Locus Specific Mutation Databases (LSDB): TAB3 Export disorders and mutations for TAB3 gene to outside databases
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Medical Newsfor TAB3 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor TAB3 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/20 PubMed articles for TAB3 gene, integrated from 7 sources (see all 20 ): (articles sorted by number of sources associating them with TAB3) TAB3, a new binding partner of the protein kinase TAK1. (PubMed id 14670075) 1 , 2 , 3, 7 Cheung P.C.... Cohen P. (2004) Role of the TAB2-related protein TAB3 in IL-1 and TNF signaling. (PubMed id 14633987) 1 , 2 , 3, 7 Ishitani T....Matsumoto K. (2003) Identification of a human NF-kappaB-activating protein, TAB3. (PubMed id 14766965) 1 , 2 , 7 Jin G.... Sherf B. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) RBCK1 negatively regulates tumor necrosis factor- and interleukin-1-triggered NF-kappaB activation by targeting TAB2/3 for degradation. (PubMed id 17449468) 2 , 7 Tian Y....Shu H.B. (2007) TAK1-dependent signaling requires functional interaction with TAB2/TAB3. (PubMed id 17158449) 1 , 7 Besse A....Darnay B.G. (2007) WDR34 is a novel TAK1-associated suppressor of the IL -1R/TLR3/TLR4-induced NF-kappaB activation pathway. (PubMed id 19521662) 2 Gao D....Chen D.Y. (2009) A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648) 2 Dephoure N.... Gygi S.P. (2008) The DNA sequence of the human X chromosome. (PubMed id 15772651) 2 Ross M.T.... Bentley D.R. (2005) Towards a proteome-scale map of the human protein-protein interaction network. (PubMed id 16189514) 1 Rual J.F....Vidal M. (2005)
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External Searches for TAB3 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing TAB3 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing TAB3 gene
(According to HUGE )
About This Section --
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Specialized Databases showing TAB3 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for TAB3 gene: Search GeneIP for patents involving TAB3 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor TAB3 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for TAB3
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Paralogs for TAB3
Pathways/Interactions for TAB3
Products for TAB3
Proteins for TAB3
Publications for TAB3
Search Box for TAB3
Summaries for TAB3
Transcripts for TAB3
Variants for TAB3
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