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Aliases & Descriptionsfor WNT8A gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions wingless-type MMTV integration site family, member 8A1 2 OTTHUMP000002233612 WNT8D1 2 3 WNT8d2 Protein Wnt-8d2 3 OTTHUMP000002234582 protein Wnt-8a2
Export aliases for WNT8A gene to outside databases Previous GC identifers: GC05P137294 GC05P138095 GC05P137450 GC05P137495 GC05P137447
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Summariesfor WNT8A gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for WNT8A : The WNT gene family consists of structurally related genes which encode secreted signaling proteins. These proteins have been implicated in oncogenesis and in several developmental processes, including regulation of cell fate and patterning during embryogenesis. This gene is a member of the WNT gene family, and may be implicated in development of early embryos as well as germ cell tumors. It encodes a protein which shows 81% amino acid identity to the mouse Wnt8A protein. (provided by RefSeq) UniProtKB/Swiss-Prot: WNT8A_HUMAN, Q9H1J5 Function : Ligand for members of the frizzled family of seven transmembrane receptors. May play an important role in thedevelopment and differentiation of certain forebrain structures, notably the hippocampus
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Genomic Viewsfor WNT8A gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the WNT8A gene promoter: NF-kappaB1 HNF-4alpha2 NF-kappaB COUP-TF1 ER-alpha GATA-1 STAT1alpha STAT1beta STAT1 STAT3 Other transcription factors Search SABiosciences Chromatin IP Primers for WNT8A Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 5q31 Ensembl cytogenetic band: 5q31.2 HGNC cytogenetic band: 5q31 WNT8A Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05P132610: view genomic region
(about GC identifiers )
Start:
132,610,733 bp from pter
End:
132,618,179 bp from pter
Size:
7,447 bases
Orientation:
plus strand
1 alternative location : Chr 5+ 137,419,581-137,428,054
RefSeq DNA sequence: NC_000005.9 NT_034772.6
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Proteinsfor WNT8A gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: WNT8A_HUMAN, Q9H1J5 (See
protein sequence )Recommended Name: Protein Wnt-8a precursor Size : 351 amino acids; 38849 Da
Subcellular location : Secreted, extracellular space, extracellular matrix
Secondary accessions : Q96S51Alternative splicing : 2 isoforms : Q9H1J5-1 Q9H1J5-2 Explore the universe of human proteins at neXtProt for WNT8A: NX_Q9H1J5
REFSEQ proteins: NP_490645.1 ENSEMBL proteins: ENSP00000424809 ENSP00000381739 ENSP00000426653 ENSP00000354726 Human Recombinant Proteins 4 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005576 extracellular region
IEA -- GO:0005578 proteinaceous extracellular matrix
ISS -- GO:0005615 colocalizes with extracellular space
ISS -- GO:0005886 plasma membrane
ISS --
About this table
WNT8A for ontologies About GeneDecksing Antibodies for WNT8A: Assays for WNT8A:
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Protein
Domains/ Familiesfor WNT8A gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
WNT8A for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q9H1J5 ProtoNet protein and cluster: Q9H1J5
1 Blocks protein family : IPB005816 Secreted growth factor Wnt protein UniProtKB/Swiss-Prot: WNT8A_HUMAN, Q9H1J5 Similarity : Belongs to the Wnt family
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Gene Functionfor WNT8A gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: WNT8A_HUMAN, Q9H1J5 Function : Ligand for members of the frizzled family of seven transmembrane receptors. May play an important role in thedevelopment and differentiation of certain forebrain structures, notably the hippocampus
4 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
WNT8A for ontologies About GeneDecksing
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Pathways & Interactionsfor WNT8A gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
WNT8A for pathways About GeneDecksing 2 Millipore Pathways for WNT8A 5/11 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for WNT8A (see all 11 )5 Kegg Pathways (Kegg details for WNT8A) : SABiosciences Pathway-Focused PCR Arrays including WNT8A : PAHS-043A PAHS-078A Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for WNT8A Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for WNT8A 5/35 Interacting proteins for WNT8A (ENSP00000354726 3 ) via UniProtKB, MINT, and/or STRING (see all 35 )About this table 5/34 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 34 ):
About this table
WNT8A for ontologies About GeneDecksing
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Drugs & Compoundsfor WNT8A gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for WNT8A
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Transcriptsfor WNT8A gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for WNT8A gene: NM_058244.2
Additional cDNA sequence: AB057725.1 BC144001.1 BC144497.1
1 DOTS entry : DT.95148953
6 AceView cDNA sequences :
NM_031933 AY009402 AB057725 NM_058244 AW663893 BQ428931
highest scoring ESTs for WNT8A :AB057725 AY009402 NM_058244 NM_031933 AW663893 BQ428931 Unigene Cluster for WNT8A:
Wingless-type MMTV integration site family, member 8A Hs.591274 Unigene Representative Sequence: BC144497 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for WNT8A ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 SP1 :                 SP2 :                
About this scheme ECgene alternative splicing isoforms for WNT8A 4 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000504809 ENST00000398754 (uc003lcd.1 ) ENST00000506684 (uc011cyj.1 uc011cyk.1 )ENST00000361560
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Expression for WNT8A gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section WNT8A expression in normal and diseased human tissues 1 / 2 / 3
2 probe-sets matching WNT8A gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
224259_at2 , 3
U133-B
1
0.36
1.00
--
--
AY009402
0.60
1.00
0.82
1
224259_at2
U133Plus2
1
0.36
1.00
--
--
--
--
--
--
--
About this table Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TCCAACCCAG SOURCE GeneReport for Unigene cluster: Hs.591274 SABiosciences Expression via Pathway-Focused PCR Arrays including WNT8A : PAHS-043A PAHS-078A
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Orthologsfor WNT8A gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for WNT8A gene from 5/9 species (see all 9 )
About this table Species with no ortholog for WNT8A ENSEMBL Gene Tree for WNT8A (if available)
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Paralogsfor WNT8A gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for WNT8A gene WNT3A 2 WNT1 2 WNT8B 2 WNT4 2 WNT6 2 WNT3 2
WNT8A for paralogs About GeneDecksing
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Genomic Variantsfor WNT8A gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 5 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for WNT8A (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for WNT8A: --
QIAGEN SeqTarget long-range PCR primers for resequencing WNT8A
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Disorders & Mutationsfor WNT8A gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
WNT8A for disorders About GeneDecksing
OMIM: 606360 Human Genome Epidemiology (HuGE) Navigator: WNT8A (2 documents) Export disorders and mutations for WNT8A gene to outside databases
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Medical Newsfor WNT8A gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor WNT8A gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 6 PubMed articles for WNT8A gene integrated from 7 sources : (articles sorted by number of sources associating them with WNT8A) Molecular cloning and characterization of human WNT8A. (PubMed id 11408932) 1 , 2 , 3 Saitoh T. and Katoh M. (2001) Studies with Wnt genes and nonsyndromic cleft lip and palate. (PubMed id 20890934) 1 Menezes R....Vieira A.R. (2010) Variation in WNT genes is associated with non-syndromic cleft lip with or without cleft palate. (PubMed id 18413325) 1 Chiquet B.T....Hecht J.T. (2008) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Expression and regulation of WNT8A and WNT8B mRNAs in human tumor cell lines: up-regulation of WNT8B mRNA by beta-estradiol in MCF-7 cells, and down-regulation of WNT8A and WNT8B mRNAs by retinoic acid in NT2 cells. (PubMed id 11956596) 1 Saitoh T....Katoh M. (2002) Wnt family proteins are secreted and associated with the cell surface. (PubMed id 8167409) 1 Smolich B.D....Papkoff J. (1993)
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External Searches for WNT8A gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing WNT8A gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing WNT8A gene
(According to HUGE )
About This Section --
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Specialized Databases showing WNT8A gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for WNT8A gene: Search GeneIP for patents involving WNT8A GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor WNT8A gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
Search Tocris compounds for WNT8A
ELISAs and CLIAs for WNT8A
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