Aliases &
Descriptions
for ZFP2 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| zinc finger protein 2 homolog (mouse)1 2 | | zinc finger protein 2 homolog2 | | ZNF7511 2 3 | | zfp-22 | | FLJ216281 2 | | Zfp-23 | | Zinc finger protein 7512 3 | | |
Export aliases for ZFP2 gene to outside databasesPrevious GC identifers: GC05P178256 GC05P178257 GC05P178322 |
Summaries
for ZFP2 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
UniProtKB/Swiss-Prot: ZFP2_HUMAN, Q6ZN57Function: Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance (Bysimilarity)
|
Genomic Views
for ZFP2 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ZFP2 gene promoter:
Cart-1 SRY C/EBPalpha MEF-2A
Other transcription factors
Search SABiosciences Chromatin IP Primers for ZFP2
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for ZFP2  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 5q35.3 Ensembl cytogenetic band: 5q35.3 HGNC cytogenetic band: 5q35.3ZFP2 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05P173049: view genomic region
(about GC identifiers)
Start:
|
173,049,444 bp from pter |
End:
|
173,086,824 bp from pter |
Size:
|
37,381 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr5+ 178,322,895-178,360,213 |
RefSeq DNA sequence:- NC_000005.9 NT_023133.13
|
Proteins
for ZFP2 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
|
UniProtKB/Swiss-Prot: ZFP2_HUMAN, Q6ZN57 (See
protein sequence)Recommended Name: Zinc finger protein 2 homolog Size: 461 amino acids; 52740 Da
Subcellular location: Nucleus (Probable)
Sequence caution: Sequence=BAB15104.1; Type=Erroneous initiation;
Secondary accessions: A5PLN5 B7ZM23 Q9H6Z6Explore the universe of human proteins at neXtProt for ZFP2: NX_Q6ZN57
REFSEQ proteins: NP_085116.2
ENSEMBL proteins: ENSP00000354453 ENSP00000429095 ENSP00000431074 ENSP00000430980 ENSP00000430531
Human Recombinant Proteins
2 Gene Ontology (GO) cellular component terms (GO ID links to tree view): About this table
ZFP2 for ontologies About GeneDecksing
Antibodies for ZFP2:
Assays for ZFP2: |
Protein
Domains/
Families
for ZFP2 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ZFP2 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q6ZN57ProtoNet protein and cluster: Q6ZN57 1 Blocks protein family: IPB007086 C2H2-type zinc finger signature
UniProtKB/Swiss-Prot: ZFP2_HUMAN, Q6ZN57Similarity: Belongs to the krueppel C2H2-type zinc-finger protein familySimilarity: Contains 13 C2H2-type zinc fingers |
Gene Function
for ZFP2 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
|
UniProtKB/Swiss-Prot: ZFP2_HUMAN, Q6ZN57Function: Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance (Bysimilarity)
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view): About this table
ZFP2 for ontologies About GeneDecksing
|
Pathways & Interactions
for ZFP2 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SABiosciences Custom Pathway-Focused PCR Arrays for ZFP2
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZFP2
1 Interacting protein for ZFP2 (Q6ZN572) via UniProtKB, MINT, and/or STRINGAbout this table
1 Gene Ontology (GO) biological process term (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0045449 | regulation of transcription |
IEA | -- |
About this table
ZFP2 for ontologies About GeneDecksing
|
Drugs & Compounds
for ZFP2 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for ZFP2
|
Transcripts
for ZFP2 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for ZFP2 gene: NM_030613.2 Additional cDNA sequence: AK025281.1 AK131367.1 BC132779.1 BC132781.1 BC142989.1 BC144213.1 BC144216.1 3 DOTS entries: DT.75198419 DT.411647 DT.120864386 7 AceView cDNA sequences: AK131367 NM_030613 BP376633 AK025281 AI908348 AI908349 BQ343739
 highest scoring ESTs for ZFP2:R07943 AI908348 AK025281 BQ343739 AK131367 AI908349 BP376633 NM_030613 BC132779 BC132781 Unigene Cluster for ZFP2: Zinc finger protein 2 homolog (mouse) Hs.654533 [show with all ESTs]Unigene Representative Sequence: BC142989
GeneLoc Exon Structure
5 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000361362(uc003mjn.1 uc010jky.2 uc010jkx.1) ENST00000520660
ENST00000520805 ENST00000520301 ENST00000523286
|
Expression
for ZFP2 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| ZFP2 expression in normal and diseased human tissues
1 / 2 / 3 2 probe-sets matching ZFP2 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 207757_at2, 3
|
U133-A |
1 |
0.91 |
1.00 |
-- |
-- |
NM_030613 |
0.40 |
0.67 |
0.55 |
1 |
| 207757_at2
|
U133Plus2 |
1 |
0.91 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: CTGAAGATAA
SOURCE GeneReport for Unigene cluster: Hs.654533
SABiosciences Custom PCR Arrays for ZFP2
|
Orthologs
for ZFP2 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ZFP2 gene from 3 species
About this table Species with no ortholog for ZFP2
ENSEMBL Gene Tree for ZFP2 (if available) |
Paralogs
for ZFP2 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for ZFP2 gene
- ZNF712 ZNF162 ZNF5012 ZNF6232 ZNF232 ZNF8522 ZFP32 ZNF1672
- ZNF5022 ZNF2522 ZNF6602 ZNF352
ZFP2 for paralogs About GeneDecksing
|
Genomic Variants
for ZFP2 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 5 pos | Sequence | Recs | AA
Chg | Type | More | Recs | Allele
freq | Pop | Total
sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for ZFP2 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 4 variations for ZFP2
4 CNVs: 81152 64393 93389 59252 | | QIAGEN SeqTarget long-range PCR primers for resequencing ZFP2 |
|
Disorders & Mutations
for ZFP2 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Medical News
for ZFP2 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for ZFP2 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
5 PubMed articles for ZFP2 gene integrated from 7 sources:
(articles sorted by number of sources associating them with ZFP2)- An atlas of combinatorial transcriptional regulation in mouse and man. (PubMed id 20211142)1 Ravasi T....Hayashizaki Y. (2010 Mar 5)
- Functional proteomics mapping of a human signaling pathway. (PubMed id 15231748)1 Colland F....Gauthier J.M. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)2 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for ZFP2 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing ZFP2 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ZFP2 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ZFP2 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for ZFP2 gene:
Search GeneIP for patents involving ZFP2
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ZFP2 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
|
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