Aliases &
Descriptions
for ZNF497 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| zinc finger protein 4971 2 | | FLJ447731 2 | | zinc finger-like protein2 |
Export aliases for ZNF497 gene to outside databasesPrevious GC identifers: GC19M063559 GC19M063557 GC19M058865 |
Summaries
for ZNF497 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
UniProtKB/Swiss-Prot: ZN497_HUMAN, Q6ZNH5Function: May be involved in transcriptional regulation
|
Genomic Views
for ZNF497 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ZNF497 gene promoter:
STAT3 CUTL1 C/EBPalpha TBP TFIID STAT6 STAT5B STAT5A STAT4 STAT2
Other transcription factors
Search SABiosciences Chromatin IP Primers for ZNF497
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for ZNF497  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 19q13.43 Ensembl cytogenetic band: 19q13.43 HGNC cytogenetic band: 19q13.43ZNF497 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 19 GeneLoc Exon Structure GeneLoc location for GC19M055174: view genomic region
(about GC identifiers)
Start:
|
55,174,881 bp from pter |
End:
|
55,183,275 bp from pter |
Size:
|
8,395 bases |
Orientation:
|
minus strand |
1 alternative location:
| Chr19- 58,865,725-58,874,120 |
RefSeq DNA sequence:- NC_000019.9 NT_011109.16
|
Proteins
for ZNF497 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
|
UniProtKB/Swiss-Prot: ZN497_HUMAN, Q6ZNH5 (See
protein sequence)Recommended Name: Zinc finger protein 497 Size: 498 amino acids; 54721 Da
Subcellular location: Nucleus (Potential)
Secondary accessions: Q05AG8 Q0VF48 Q6ZTD2 Q9UIA8Explore the universe of human proteins at neXtProt for ZNF497: NX_Q6ZNH5
REFSEQ proteins: NP_940860.1
ENSEMBL proteins: ENSP00000311183 ENSP00000375579
Human Recombinant Proteins
2 Gene Ontology (GO) cellular component terms (GO ID links to tree view): About this table
ZNF497 for ontologies About GeneDecksing
Antibodies for ZNF497:
Assays for ZNF497: |
Protein
Domains/
Families
for ZNF497 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ZNF497 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q6ZNH5ProtoNet protein and cluster: Q6ZNH5 UniProtKB/Swiss-Prot: ZN497_HUMAN, Q6ZNH5Similarity: Belongs to the krueppel C2H2-type zinc-finger protein familySimilarity: Contains 14 C2H2-type zinc fingers |
Gene Function
for ZNF497 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
|
UniProtKB/Swiss-Prot: ZN497_HUMAN, Q6ZNH5Function: May be involved in transcriptional regulation
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view): About this table
ZNF497 for ontologies About GeneDecksing
|
Pathways & Interactions
for ZNF497 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SABiosciences Custom Pathway-Focused PCR Arrays for ZNF497
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF497
1 Gene Ontology (GO) biological process term (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0045449 | regulation of transcription |
IEA | -- |
About this table
ZNF497 for ontologies About GeneDecksing
|
Drugs & Compounds
for ZNF497 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for ZNF497
|
Transcripts
for ZNF497 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for ZNF497 gene: NM_198458.1 Additional cDNA sequence: AF085829.1 AK125350.1 AK126727.1 AK131209.1 AK172804.1 AY927604.1 BC118983.1 BC125273.1 4 DOTS entries: DT.435008 DT.75107587 DT.95204464 DT.99998769 24/152 AceView cDNA sequences (see all 152): CB135246 AW470952 CB121414 CR604603 CR614062 CB163893 CB144217 AL118990 CB148855 AL118991 CB130088 BM153273 BF196450 CB130118 BM722278 CB148792 AB073611 CR609084 CB130068 CB130078 CB138248 CB115657 CR603363 CB130055
 highest scoring ESTs for ZNF497:AK126727 AK131209 AA921779 AI216349 AI475755 AI633613 AI824206 AW242829 AW572299 BC118983 Unigene Cluster for ZNF497: Zinc finger protein 497 Hs.447840 [show with all ESTs]Unigene Representative Sequence: AK126727
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for ZNF497
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5a | · | 5b | · | 5c | · | 5d |
|---|
|
| SP1: | | | | | | | | | - | | | | | | | | | | | | | | | | |
| SP2: | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | - | | - | | | | | | | | | | |
| SP4: | | | | | | | | | - | | | | - | | - | | | | | | | | | | |
| SP5: | | | | | | | | | - | | - | | - | | - | | | | | | | | | |
About this scheme
ECgene alternative splicing isoforms for ZNF497
2 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000311044(uc002qsh.1 uc002qsi.1) ENST00000391697
|
Expression
for ZNF497 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| ZNF497 expression in normal and diseased human tissues
1 / 2 / 3 3 probe-sets matching ZNF497 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 49578_s_at2, 3
|
U95-C |
1 |
0.69 |
1.00 |
1.00 |
1.00 |
R69079 |
0.40 |
0.50 |
0.45 |
1 |
| 230857_s_at2, 3
|
U133-B |
1 |
0.73 |
1.00 |
-- |
-- |
BF061453 |
0.40 |
0.50 |
0.45 |
1 |
| 230857_s_at2
|
U133Plus2 |
1 |
0.73 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
ZNF497 for expression About GeneDecksing
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: TTTGCACTGG
SOURCE GeneReport for Unigene cluster: Hs.447840
SABiosciences Custom PCR Arrays for ZNF497
|
Orthologs
for ZNF497 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ZNF497 gene from 1 species
| Organism |
Gene |
Locus |
Description |
Human
Similarity |
NCBI accessions |
chimpanzee
(Pan troglodytes) |
ZNF4971 |
-- |
zinc finger protein 497 |
99.26(n)
98.19(a) |
742260 XM_001145356.1 XP_001145356.1 |
About this table Species with no ortholog for ZNF497
ENSEMBL Gene Tree for ZNF497 (if available) |
Paralogs
for ZNF497 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for ZNF497 gene
- ZNF5752 REPIN12 ZNF8352
ZNF497 for paralogs About GeneDecksing
|
Genomic Variants
for ZNF497 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Chr 19 pos | Sequence | Recs | AA
Chg | Type | More | Recs | Allele
freq | Pop | Total
sample | More |
|---|
About this tableHapMap Linkage Disequilibrium images for ZNF497 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 6 variations for ZNF497
6 CNVs: 50240 50238 50237 10572 50239 5119 | | QIAGEN SeqTarget long-range PCR primers for resequencing ZNF497 |
|
Disorders & Mutations
for ZNF497 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Medical News
for ZNF497 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for ZNF497 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
3 PubMed articles for ZNF497 gene integrated from 7 sources:
(articles sorted by number of sources associating them with ZNF497)- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for ZNF497 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing ZNF497 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ZNF497 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ZNF497 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for ZNF497 gene:
Search GeneIP for patents involving ZNF497
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ZNF497 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
|
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