Aliases &
Descriptions
for ZNF511 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases & Descriptions |
|---|
| zinc finger protein 5111 2 | | MGC300061 2 |
Export aliases for ZNF511 gene to outside databasesPrevious GC identifers: GC10P134595 GC10P135011 GC10P134973 GC10P135121 |
Summaries
for ZNF511 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
UniProtKB/Swiss-Prot: ZN511_HUMAN, Q8NB15Function: May be involved in transcriptional regulation
|
Genomic Views
for ZNF511 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60),
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences)
About This Section
|
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ZNF511 gene promoter:
ER-alpha STAT5A Bach1 Elk-1 IRF-7A GATA-2 GATA-1 GATA-3 RSRFC4 AREB6
Other transcription factors
Search SABiosciences Chromatin IP Primers for ZNF511
Epigenetics:
|  | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for ZNF511  |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 10q26.3 Ensembl cytogenetic band: 10q26.3 HGNC cytogenetic band: 10q26.3ZNF511 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10P128668: view genomic region
(about GC identifiers)
Start:
|
128,668,302 bp from pter |
End:
|
128,672,525 bp from pter |
Size:
|
4,224 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr10+ 135,121,979-135,126,666 |
RefSeq DNA sequence:- NC_000010.10 NT_008818.16
|
Proteins
for ZNF511 gene
(According to
1UniProtKB,
neXtProt,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological, and/or
ProSpec,
Biochemical Assays by
Millipore,
Sigma-Aldrich,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene,
Antibodies by
Millipore,
Sigma-Aldrich,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals, and/or
Epitomics)
About This Section
|
UniProtKB/Swiss-Prot: ZN511_HUMAN, Q8NB15 (See
protein sequence)Recommended Name: Zinc finger protein 511 Size: 262 amino acids; 29428 Da
Subcellular location: Nucleus (Potential)
Sequence caution: Sequence=AAH15139.1; Type=Erroneous initiation;
Secondary accessions: A8K8L5 Q8WUP1 Q96BV2Alternative splicing: 2 isoforms: Q8NB15-1 Q8NB15-2 Explore the universe of human proteins at neXtProt for ZNF511: NX_Q8NB15
Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_665805.2
ENSEMBL proteins: ENSP00000355251 ENSP00000351929
Human Recombinant Proteins
2 Gene Ontology (GO) cellular component terms (GO ID links to tree view): About this table
ZNF511 for ontologies About GeneDecksing
Antibodies for ZNF511:
Assays for ZNF511: |
Protein
Domains/
Families
for ZNF511 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ZNF511 for domains About GeneDecksing
3 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q8NB15ProtoNet protein and cluster: Q8NB15 UniProtKB/Swiss-Prot: ZN511_HUMAN, Q8NB15Similarity: Belongs to the krueppel C2H2-type zinc-finger protein familySimilarity: Contains 3 C2H2-type zinc fingers |
Gene Function
for ZNF511 gene
(According to UniProtKB,
IUBMB,and/or
Genatlas, Animal models from MGI Dec 24 2010,
shRNA from
OriGene,
Sigma-Aldrich,
RNAi from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Clones from Millipore,
Sigma-Aldrich,
OriGene,
GenScript,
Sino Biological,
Cell Lines from GenScript,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene.)
About This Section
|
UniProtKB/Swiss-Prot: ZN511_HUMAN, Q8NB15Function: May be involved in transcriptional regulation
3 Gene Ontology (GO) molecular function terms (GO ID links to tree view): About this table
ZNF511 for ontologies About GeneDecksing
|
Pathways & Interactions
for ZNF511 gene
(Pathways according to
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
PCR Arrays from
SABiosciences,
Proteins Network according to
SABiosciences,
Sigma-Aldrich,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene).
About This Section
|
SABiosciences Custom Pathway-Focused PCR Arrays for ZNF511
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF511
1 Gene Ontology (GO) biological process term (GO ID links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0045449 | regulation of transcription |
IEA | -- |
About this table
ZNF511 for ontologies About GeneDecksing
|
Drugs & Compounds
for ZNF511 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for ZNF511
|
Transcripts
for ZNF511 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
Millipore,
siRNAs from
Sigma-Aldrich,
OriGene,
Qiagen,
Super-pooled esiRNAs from Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
microRNA from Sigma-Aldrich,
Qiagen,
SABiosciences,
Tagged/untagged cDNA clones from
OriGene,
Sigma-Aldrich,
GenScript,
Primers from
OriGene and/or
SABiosciences)
About This Section
|
REFSEQ mRNAs for ZNF511 gene: NM_145806.2 Additional cDNA sequence: AK292380.1 BC015139.1 BC019897.1 CR590099.1 CR590792.1 CR604803.1 CR607321.1 CR611284.1 CR617311.1 CR620153.1 7 DOTS entries: DT.91680333 DT.442363 DT.95255003 DT.121285603 DT.97843668 DT.121285606 DT.92430796 24/157 AceView cDNA sequences (see all 157): CR611284 BE901320 CR607321 BM811325 BQ011799 BX332048 BM545376 AL583632 BE301775 CR604803 BE018297 AI202178 CA944614 AI269077 BU580076 AW513083 AI269185 CA946786 AI890896 CR590099 BC019897 BM725265 BG252576 BM677708
 highest scoring ESTs for ZNF511:AI744466 AW005035 AA026211 AA308302 AA380416 AA404504 AA527985 AA594507 AA639397 AA730141 Unigene Cluster for ZNF511: Zinc finger protein 511 Hs.422113 [show with all ESTs]Unigene Representative Sequence: BF242702
GeneLoc Exon Structure
4 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000361518(uc001lmj.1 uc001lmk.1) ENST00000482153 ENST00000463816
ENST00000359035(uc001lml.1 uc001lmm.1)
|
Expression
for ZNF511 gene
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Primers from
OriGene and/or
SABiosciences
)
About This Section
| ZNF511 expression in normal and diseased human tissues
1 / 2 / 3 4 probe-sets matching ZNF511 gene
Affymetrix
probe-set |
Array |
GeneAnnot data |
GeneNote data |
GeneTide data |
| # genes |
Sensitivity |
Specificity |
Correlation |
Length |
Gb_Accession |
Consensus |
Uniqueness |
Score |
Rank |
| 43491_at2, 3
|
U95-B |
1 |
0.88 |
1.00 |
0.98 |
1.01 |
AW005035 |
1.00 |
1.00 |
1.00 |
1 |
| 56225_at2, 3
|
U95-B |
1 |
0.81 |
1.00 |
0.96 |
0.99 |
AI744466 |
1.00 |
1.00 |
1.00 |
1 |
| 225307_at2, 3
|
U133-B |
1 |
0.82 |
1.00 |
-- |
-- |
AL583632 |
0.60 |
1.00 |
0.82 |
1 |
| 225307_at2
|
U133Plus2 |
1 |
0.82 |
1.00 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
About this table
ZNF511 for expression About GeneDecksing
Data from
Genenote
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: AAATAAGTAT
SOURCE GeneReport for Unigene cluster: Hs.422113
SABiosciences Custom PCR Arrays for ZNF511
|
Orthologs
for ZNF511 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ZNF511 gene from 5/10 species (see all 10)
About this table Species with no ortholog for ZNF511
ENSEMBL Gene Tree for ZNF511 (if available) |
Paralogs
for ZNF511 gene(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| -- |
Genomic Variants
for ZNF511 gene(SNPs according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
About This Section
|
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 13 variations for ZNF511
13 CNVs: 29878 2896 29877 5270 4721 8673 5272 4722 5273 5271 3829 53744 4724 | | QIAGEN SeqTarget long-range PCR primers for resequencing ZNF511 |
|
Disorders & Mutations
for ZNF511 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
LSDB, HGMD, GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Medical News
for ZNF511 gene(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for ZNF511 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6UniProtKB/TrEMBL, and/or
7Novoseek)
About This Section
|
4 PubMed articles for ZNF511 gene integrated from 7 sources:
(articles sorted by number of sources associating them with ZNF511)- The DNA sequence and comparative analysis of human chromosome 10. (PubMed id 15164054)1, 2 Deloukas P.... Rogers J. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1, 3 Strausberg R.L....Marra M.A. (2002)
|
External Searches for ZNF511 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing ZNF511 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ZNF511 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ZNF511 gene(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
|
About This Section
| Patent Information for ZNF511 gene:
Search GeneIP for patents involving ZNF511
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ZNF511 gene(Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
Clones available from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, PCR Arrays from SABiosciences, Drugs and/or compounds by Sigma-Aldrich, Tocris Bioscience, and/or
Enzo Life Sciences)
About This Section
|
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